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Overview

Uniprot IDA0A286Y121
Protein NameDNA repair protein XRCC1
Gene NameXRCC1
OrganismCavia porcellus

Kla Sites from experimental identification

Position Flanking peptide
169 SQKVTVTKLGQFRVK
247 ESPKGKRKLDLNVEE

Function

Scaffold protein involved in DNA single-strand break repair by mediating the assembly of DNA break repair protein complexes. Negatively regulates ADP-ribosyltransferase activity of PARP1 during base-excision repair in order to prevent excessive PARP1 activity. Recognizes and binds poly-ADP-ribose chains: specifically binds auto-poly-ADP-ribosylated PARP1, limiting its activity

Protein Sequence

10 MPEIRLRHVV 20 SCSSQDSTHC 30 AENLLKADTY 40 RKWRAAKAGE 50 KSISVVLQLE 60 KEEQIHSVDI 70 GNNGSAFVEV 80 LVGSSAGGAS 90 EQDYEVLLVT 100 SSFMSPSESR 110 SGSNPNRVRI 120 FGPDKLVRAA 130 AEKRWDRIKI 140 VCSQPYTKDS 150 PYGLSFIRLH 160 SPPDKEEAEV 170 PSQKVTVTKL 180 GQFRVKEEDE 190 SASSLRPGAL 200 FFGRINKTSP 210 ATTSDPTGPS 220 YAAATLQASS 230 ATASASPISK 240 AVGSTSQPQE 250 SPKGKRKLDL 260 NVEEKKAPSK 270 PSAQLSPPAL 280 KRPKLPAPTR 290 TPAAAPVPAA 300 AQRAVPGKPR 310 GDGTEPRGAR 320 AGPQELGKIL 330 QGVVVVLSGF 340 QNPFRSELRD 350 KALELGAKYR 360 PDWTPDSTHL 370 ICAFANTPKY 380 SQVLGLGGRI 390 VRKEWVLDCH 400 RMRRRLPSRR 410 YLMAGPDSSS 420 EEEGGCPSGS 430 SGDEAPRLPR 440 KTKAKPPPAS 450 GPGSPQKPLS 460 PKETKAASLG 470 PQENSDTEEE 480 QSAGRDDGEE 490 ESGDTEDELR 500 RVAEQREHRP 510 APGQENGEDP 520 YAGSTDENTD 530 NEDRPESPDQ 540 PIPELPDFFQ 550 GKHFFLYGEF 560 PGDERRKLIR 570 YVTAFNGELE 580 DYMSDRVQFV 590 ITAQEWDPSF 600 EEALMDNPSL 610 AFVRPRWIYS 620 CNEKQKLLPH QLYGVVPQA

Gene Ontology

Classification GO ID Description
Cellular Component GO:0000785 chromatin
Cellular Component GO:0000781 chromosome, telomeric region
Cellular Component GO:0070522 ERCC4-ERCC1 complex
Cellular Component GO:0005730 nucleolus
Cellular Component GO:0005654 nucleoplasm
Cellular Component GO:0090734 site of DNA damage
Molecular Function GO:1990599 3' overhang single-stranded DNA endodeoxyribonuclease activity
Molecular Function GO:0160002 ADP-D-ribose modification-dependent protein binding
Molecular Function GO:0019899 enzyme binding
Molecular Function GO:0032356 oxidized DNA binding
Molecular Function GO:0072572 poly-ADP-D-ribose binding
Molecular Function GO:1990165 single-strand break-containing DNA binding
Biological Process GO:0006284 base-excision repair
Biological Process GO:0006303 double-strand break repair via nonhomologous end joining
Biological Process GO:1905765 negative regulation of protection from non-homologous end joining at telomere
Biological Process GO:1905051 regulation of base-excision repair
Biological Process GO:0033194 response to hydroperoxide
Biological Process GO:0000012 single strand break repair
Biological Process GO:0061819 telomeric DNA-containing double minutes formation

Reference

[1] Feng J, Chen X, Li R, Xie Y, Zhang X et al.. Lactylome analysis reveals potential target modified proteins in the retina of form-deprivation myopia.. iScience 27(9):110606. 2024 Sep 20. PMID: 39246443.