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Overview

Uniprot IDA0A287AB29
Protein NameYTH domain-containing family protein
Gene NameYTHDC1
OrganismSus scrofa

Kla Sites from experimental identification

Position Flanking peptide
127 SASREPYKSQPEKTC
96 GKSVTEYKNEEYQRS

Function

Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs, and regulates mRNA stability. M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing

Protein Sequence

10 MAADSREEKD 20 GELNVLDDIL 30 TEVPEQDDEL 40 YNPESEQDKN 50 EKKGSKRKSD 60 RMESTDTKRQ 70 KPSVHSRQLI 80 SKPLSSSVSN 90 NKRMASTKGK 100 SVTEYKNEEY 110 QRSERNKRIE 120 ADRKIRLSSS 130 ASREPYKSQP 140 EKTCLRKRDS 150 ERRVKSPTPD 160 GSERIGLEVD 170 RRASRSSQSS 180 KEEVNSEEYG 190 SDHETGSSGS 200 SDEQGNNTEN 210 EEEGVEDVEE 220 DEEVEEDAEE 230 DEEVDEDGEE 240 EEEEEEEEEE 250 EEEEEEEEYE 260 QDERDQKEEG 270 NDYDTRSEAS 280 DSDSESVSFT 290 DGSVRSGSGT 300 DGSDEKKKER 310 KRARGISPII 320 FDRSGSSASE 330 SYAGSEKKHE 340 KLSSSVRAVR 350 KDQTSKLKYV 360 LQDARFFLIK 370 SNNHENVSLA 380 KAKGVWSTLP 390 VNEKKLNAAF 400 RSARSVILIF 410 SVRESGKFQG 420 FARLSSESHH 430 GGSPIHWVLP 440 AGMNAKMLGG 450 VFKIDWICRR 460 ELPFTKSAHL 470 TNPWNEHKPV 480 KIGRDGQEIE 490 LECGTQLCLL 500 FPPDESIDLY 510 QVIHKMRHKR 520 RMHSQPRSRG 530 RPSRREPVRD 540 VGRRRPEEYD 550 IHNSRKKPRI 560 DYAPEFHQRP 570 GYLKDPRYQE 580 VDRRFSGVRR 590 DVFLNGSYND 600 YVREFHNMGP 610 PPPWQGMTPY 620 PGMEQPPHHP 630 YYQHHAPPPQ 640 AHPPYSGHHP 650 VPHEARYRDK 660 RVHDYDMRVD 670 DFLRRTQAVV 680 SGRRSRPRER 690 DRERERDRPR 700 DNRRDRERDR 710 GRDRERERER 720 LCDRDRDRGE RGRYRR

Gene Ontology

Classification GO ID Description
Cellular Component GO:0016607 nuclear speck
Cellular Component GO:0005654 nucleoplasm
Molecular Function GO:0003729 mRNA binding
Molecular Function GO:1990247 N6-methyladenosine-containing RNA reader activity
Biological Process GO:0050873 brown fat cell differentiation
Biological Process GO:0009048 dosage compensation by inactivation of X chromosome
Biological Process GO:0006406 mRNA export from nucleus
Biological Process GO:0006376 mRNA splice site recognition
Biological Process GO:0000398 mRNA splicing, via spliceosome
Biological Process GO:0010608 post-transcriptional regulation of gene expression
Biological Process GO:0000381 regulation of alternative mRNA splicing, via spliceosome

Reference

[1] Fan S, Zhou R, Wen H, Ye H, Ma S et al.. Global profiling of protein lactylome in porcine granulosa cells.. J Ovarian Res 18(1):177. 2025 Aug 8. PMID: 40781717.