Search Results

Overview

Uniprot IDB5DF89
Protein NameCullin-3
Gene NameCul3
OrganismRattus norvegicus

Kla Sites from experimental identification

Position Flanking peptide
6 **MSNLSKGTGSRKD

Function

Core component of multiple cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. BCR complexes and ARIH1 collaborate in tandem to mediate ubiquitination of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. The E3 ubiquitin-protein ligase activity of the complex is dependent on the neddylation of the cullin subunit and is inhibited by the association of the deneddylated cullin subunit with TIP120A/CAND1. The functional specificity of the BCR complex depends on the BTB domain-containing protein as the substrate recognition component. BCR(KLHL42) is involved in ubiquitination of KATNA1. BCR(SPOP) is involved in ubiquitination of BMI1/PCGF4, BRMS1, MACROH2A1 and DAXX, GLI2 and GLI3. Can also form a cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex containing homodimeric SPOPL or the heterodimer formed by SPOP and SPOPL; these complexes have lower ubiquitin ligase activity. BCR(KLHL9-KLHL13) controls the dynamic behavior of AURKB on mitotic chromosomes and thereby coordinates faithful mitotic progression and completion of cytokinesis. BCR(KLHL12) is involved in ER-Golgi transport by regulating the size of COPII coats, thereby playing a key role in collagen export, which is required for embryonic stem (ES) cells division: BCR(KLHL12) acts by mediating monoubiquitination of SEC31 (SEC31A or SEC31B). BCR(KLHL3) acts as a regulator of ion transport in the distal nephron; by mediating ubiquitination of WNK4. The BCR(KLHL20) E3 ubiquitin ligase complex is involved in interferon response and anterograde Golgi to endosome transport: it mediates both ubiquitination leading to degradation and 'Lys-33'-linked ubiquitination. The BCR(KLHL21) E3 ubiquitin ligase complex regulates localization of the chromosomal passenger complex (CPC) from chromosomes to the spindle midzone in anaphase and mediates the ubiquitination of AURKB. The BCR(KLHL22) ubiquitin ligase complex mediates monoubiquitination of PLK1, leading to PLK1 dissociation from phosphoreceptor proteins and subsequent removal from kinetochores, allowing silencing of the spindle assembly checkpoint (SAC) and chromosome segregation. The BCR(KLHL22) ubiquitin ligase complex is also responsible for the amino acid-stimulated 'Lys-48' polyubiquitination and proteasomal degradation of DEPDC5. Through the degradation of DEPDC5, releases the GATOR1 complex-mediated inhibition of the TORC1 pathway. The BCR(KLHL25) ubiquitin ligase complex is involved in translational homeostasis by mediating ubiquitination and subsequent degradation of hypophosphorylated EIF4EBP1 (4E-BP1). The BCR(KLHL25) ubiquitin ligase complex is also involved in lipid synthesis by mediating ubiquitination and degradation of ACLY. The BCR(KBTBD8) complex acts by mediating monoubiquitination of NOLC1 and TCOF1, leading to remodel the translational program of differentiating cells in favor of neural crest specification. Involved in ubiquitination of cyclin E and of cyclin D1 (in vitro) thus involved in regulation of G1/S transition. Involved in the ubiquitination of KEAP1, ENC1 and KLHL41. In concert with ATF2 and RBX1, promotes degradation of KAT5 thereby attenuating its ability to acetylate and activate ATM. The BCR(KCTD17) E3 ubiquitin ligase complex mediates ubiquitination and degradation of TCHP, a down-regulator of cilium assembly, thereby inducing ciliogenesis. The BCR(KLHL24) E3 ubiquitin ligase complex mediates ubiquitination of KRT14, controls KRT14 levels during keratinocytes differentiation, and is essential for skin integrity. The BCR(KLHL18) E3 ubiquitin ligase complex mediates the ubiquitination of AURKA leading to its activation at the centrosome which is required for initiating mitotic entry. The BCR(KEAP1) E3 ubiquitin ligase complex acts as a key sensor of oxidative and electrophilic stress by mediating ubiquitination and degradation of NFE2L2/NRF2, a transcription factor regulating expression of many cytoprotective genes. As part of the CUL3(KBTBD6/7) E3 ubiquitin ligase complex functions mediates 'Lys-48' ubiquitination and proteasomal degradation of TIAM1. By controlling the ubiquitination of that RAC1 guanine exchange factors (GEF), regulates RAC1 signal transduction and downstream biological processes including the organization of the cytoskeleton, cell migration and cell proliferation. The BCR(KBTBD4) E3 ubiquitin ligase complex targets CoREST corepressor complex components RCOR1, KDM1A/LSD1 and HDAC2 for proteasomal degradation with RCOR1 likely to be the primary target while degradation of KDM1A and HDAC2 is likely due to their association with RCOR1 (By similarity). It also targets RCOR3, MIER2 and MIER3 for proteasomal degradation as well as associated proteins ZNF217 and RREB1 with degradation being dependent on the presence of an ELM2 domain in the target proteins (By similarity). The BCR(ARMC5) complex mediates premature transcription termination of transcripts that are unfavorably configured for transcriptional elongation by mediating ubiquitination of Pol II subunit POLR2A (By similarity). Required for 'Lys-63'-linked ubiquitination of large ribosomal subunit protein MRPL12 (By similarity)

Protein Sequence

10 MSNLSKGTGS 20 RKDTKMRIRA 30 FPMTMDEKYV 40 NSIWDLLKNA 50 IQEIQRKNNS 60 GLSFEELYRN 70 AYTMVLHKHG 80 EKLYTGLREV 90 VTEHLINKVR 100 EDVLNSLNNN 110 FLQTLNQAWN 120 DHQTAMVMIR 130 DILMYMDRVY 140 VQQNNVENVY 150 NLGLIIFRDQ 160 VVRYGCIRDH 170 LRQTLLDMIA 180 RERKGEVVDR 190 GAIRNACQML 200 MILGLEGRSV 210 YEEDFEAPFL 220 EMSAEFFQME 230 SQKFLAENSA 240 SVYIKKVEAR 250 INEEIERVMH 260 CLDKSTEEPI 270 VKVVERELIS 280 KHMKTIVEME 290 NSGLVHMLKN 300 GKTEDLACMY 310 KLFSRVPNGL 320 KTMCECMSSY 330 LREQGKALVS 340 EEGEGKNPVD 350 YIQGLLDLKS 360 RFDRFLQESF 370 NNDRLFKQTI 380 AGDFEYFLNL 390 NSRSPEYLSL 400 FIDDKLKKGV 410 KGLTEQEVET 420 ILDKAMVLFR 430 FMQEKDVFER 440 YYKQHLARRL 450 LTNKSVSDDS 460 EKNMISKLKT 470 ECGCQFTSKL 480 EGMFRDMSIS 490 NTTMDEFRQH 500 LQATGVSLGG 510 VDLTVRVLTT 520 GYWPTQSATP 530 KCNIPPAPRH 540 AFEIFRRFYL 550 AKHSGRQLTL 560 QHHMGSADLN 570 ATFYGPVKKE 580 DGSEVGVGGA 590 QVTGSNTRKH 600 ILQVSTFQMT 610 ILMLFNNREK 620 YTFEEIQQET 630 DIPERELVRA 640 LQSLACGKPT 650 QRVLTKEPKS 660 KEIESGHIFT 670 VNDQFTSKLH 680 RVKIQTVAAK 690 QGESDPERKE 700 TRQKVDDDRK 710 HEIEAAIVRI 720 MKSRKKMQHN 730 VLVAEVTQQL 740 KARFLPSPVV 750 IKKRIEGLIE 760 REYLARTPED RKVYTYVA

Gene Ontology

Classification GO ID Description
Cellular Component GO:0005813 centrosome
Cellular Component GO:0031463 Cul3-RING ubiquitin ligase complex
Cellular Component GO:0005737 cytoplasm
Cellular Component GO:0098978 glutamatergic synapse
Cellular Component GO:0005794 Golgi apparatus
Cellular Component GO:0072686 mitotic spindle
Cellular Component GO:0005654 nucleoplasm
Cellular Component GO:0005634 nucleus
Cellular Component GO:0005886 plasma membrane
Cellular Component GO:0005827 polar microtubule
Cellular Component GO:0098794 postsynapse
Cellular Component GO:0036126 sperm flagellum
Cellular Component GO:0000922 spindle pole
Molecular Function GO:0030332 cyclin binding
Molecular Function GO:0042802 identical protein binding
Molecular Function GO:0005112 Notch binding
Molecular Function GO:0031208 POZ domain binding
Molecular Function GO:0160072 ubiquitin ligase complex scaffold activity
Molecular Function GO:0061630 ubiquitin protein ligase activity
Biological Process GO:0031398 positive regulation of protein ubiquitination
Biological Process GO:1904263 positive regulation of TORC1 signaling
Biological Process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
Biological Process GO:0051865 protein autoubiquitination
Biological Process GO:0030163 protein catabolic process
Biological Process GO:0031648 protein destabilization
Biological Process GO:0070936 protein K48-linked ubiquitination
Biological Process GO:0006513 protein monoubiquitination
Biological Process GO:0000209 protein polyubiquitination
Biological Process GO:0016567 protein ubiquitination
Biological Process GO:1900076 regulation of cellular response to insulin stimulus
Biological Process GO:0006357 regulation of transcription by RNA polymerase II
Biological Process GO:0140252 regulation protein catabolic process at postsynapse
Biological Process GO:0017145 stem cell division
Biological Process GO:0043149 stress fiber assembly
Biological Process GO:0001831 trophectodermal cellular morphogenesis
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process
Biological Process GO:0016055 Wnt signaling pathway
Molecular Function GO:0031625 ubiquitin protein ligase binding
Biological Process GO:0031145 anaphase-promoting complex-dependent catabolic process
Biological Process GO:0016477 cell migration
Biological Process GO:0000902 cell morphogenesis
Biological Process GO:0030030 cell projection organization
Biological Process GO:0071230 cellular response to amino acid stimulus
Biological Process GO:0034599 cellular response to oxidative stress
Biological Process GO:0048208 COPII vesicle coating
Biological Process GO:0040016 embryonic cleavage
Biological Process GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport
Biological Process GO:0044346 fibroblast apoptotic process
Biological Process GO:0007369 gastrulation
Biological Process GO:0010467 gene expression
Biological Process GO:0001701 in utero embryonic development
Biological Process GO:0006954 inflammatory response
Biological Process GO:0007229 integrin-mediated signaling pathway
Biological Process GO:0001822 kidney development
Biological Process GO:0072576 liver morphogenesis
Biological Process GO:0000278 mitotic cell cycle
Biological Process GO:0007080 mitotic metaphase chromosome alignment
Biological Process GO:0035024 negative regulation of Rho protein signal transduction
Biological Process GO:0000122 negative regulation of transcription by RNA polymerase II
Biological Process GO:0032480 negative regulation of type I interferon production
Biological Process GO:0071630 nuclear protein quality control by the ubiquitin-proteasome system
Biological Process GO:0032467 positive regulation of cytokinesis
Biological Process GO:1901992 positive regulation of mitotic cell cycle phase transition
Biological Process GO:0045842 positive regulation of mitotic metaphase/anaphase transition

Reference

[1] Sheng L, Xu H, Wang Y, Ni J, Xiang T et al.. Systematic analysis of lysine lactylation in nucleus pulposus cells.. iScience 27(11):111157. 2024 Nov 15. PMID: 39524337.

[2] Chen Y, Sun W, Sun Z, Zhao H, Wu T et al.. Effect of electroacupuncture on hippocampal protein lactylation in a rat model of vascular dementia.. Front Neurol 16:1629474. 2025. PMID: 40963935.