Search Results
Overview
| Uniprot ID | D4ABN8 |
|---|---|
| Protein Name | 5'-3' exoribonuclease 1 |
| Gene Name | Xrn1 |
| Organism | Rattus norvegicus |
Kla Sites from experimental identification
| Position | Flanking peptide |
|---|---|
| 752 | TQKVYLGKTAPPCKV |
Function
No function data available.
Protein Sequence
10
MGVPKFYRWI
20
SERYPCLSEV
30
VKEHQIPEFD
40
NLYLDMNGII
50
HQCSHPNDDD
60
VHFRISDDKI
70
FTDIFHYLEV
80
LFRIIKPRKV
90
FFMAVDGVAP
100
RAKMNQQRGR
110
RFRSAKEAED
120
KIKKAIEKGE
130
TLPTEARFDS
140
NCITPGTEFM
150
ARLHEHLKYF
160
VNMKISTDKS
170
WQGVTIYFSG
180
HETPGEGEHK
190
IMEFIRSEKA
200
KPDHDPNTRH
210
CLYGLDADLI
220
MLGLTSHEAH
230
FSLLREEVRF
240
GGKKTQRVCA
250
PEETTFHLLH
260
LSLMREYIDY
270
EFSALKEKIT
280
FKYDIEKIID
290
DWILMGFLVG
300
NDFIPHLPHL
310
HINHDALPLL
320
YGTYIAILPE
330
LGGYINESGH
340
LNLPRFERYL
350
VKLSDFDREH
360
FSEVFVDLKW
370
FESKVGNKYL
380
NEAAGAAAEE
390
AKSCKDKRKV
400
KGQENSLSWA
410
ALDKREGEGV
420
ASRDNFEDET
430
EDDDLFETEF
440
RQYKRTYYMT
450
KMGVDVVSDE
460
FLADQAACYV
470
QAIQWILHYY
480
YHGVQSWSWY
490
YPYHYAPFLS
500
DIRNISTLKI
510
HFELGKPFKP
520
FEQLLAVLPS
530
ASKTLLPTCY
540
QHLMTSEDSP
550
IIEYYPPDFK
560
TDLNGKQQEW
570
EAVVLIPFID
580
EKRLLEAMET
590
CNHSLKKEER
600
KRNQHSECLM
610
CWYDSDTEFT
620
YSSPWPEKFP
630
AIERCSTRYK
640
IISLDAWRVD
650
INKNKITRVD
660
QKALYFCGFP
670
TLKHIKHKFF
680
LKKSGVQVFQ
690
QSSRGENMML
700
EITVNAEPDE
710
LSIENIASSV
720
LGKSVFVNWP
730
HLEEARVVAV
740
SDGETKFYME
750
EPPGTQKVYL
760
GKTAPPCKVI
770
QLSDKEQSNW
780
TKEIQGISEQ
790
YLRRKGIMIN
800
ETSAVVYAQL
810
LTGRRYQVNQ
820
NGEVRLEKQW
830
SKQSLPFVYQ
840
TIVKDVRAFD
850
SRFSNIKTLD
860
DLFPPRSVVF
870
MLGTPYYGCT
880
GEVQDSGDVI
890
TEGRIRVVFS
900
IPCEPNLDAL
910
IQNQHKYSIK
920
YNPGYVLAGR
930
LGVSGYLVSR
940
FTGSIFIGRG
950
SRRNPHGDHK
960
ANVGLNLKFN
970
KKNEEVPGYT
980
KRVGSEWMYS
990
SAAEQLLAEY
1000
IERAPELFSY
1010
IAQNSQEDVF
1020
YEDDIWPGES
1030
ESGAEKVQEI
1040
ITWLKGHPVS
1050
TLSRSSCDLH
1060
ILDAAIVEKI
1070
EEEVEKCKQR
1080
KNNKKVRVTV
1090
KPHLLFRPLE
1100
QQHGAIPDRD
1110
AEFRLFDRVV
1120
NVRENFSVPV
1130
GLRGTIIGIK
1140
GANREADVLF
1150
EVLFDEEFPG
1160
GLTIRCSPGR
1170
GYRLPTSALV
1180
NLSHGSRCET
1190
GNQKLTAIVK
1200
PQPAVSHCSV
1210
NSSVSSGHMG
1220
GLNHSPQSLF
1230
LPTQVPTKGD
1240
DEFCNIWQSL
1250
QGSGKIQHLQ
1260
PTVQEKGAVL
1270
PQEISQVTES
1280
HKSGFNDHSV
1290
RHQQRKHDPH
1300
RKFKEEYKSP
1310
KAECQNQKLS
1320
NKQTSGASAR
1330
CNIKLLKRNE
1340
SPGTSEAQKV
1350
VTSYPNAVHK
1360
PHSGIESFLA
1370
SLNISKESEV
1380
QLPHGEPPDE
1390
AHLSPQSFAM
1400
KGTRMLKEIL
1410
KIDSPDTTDS
1420
KNDVKKFDNE
1430
VMVSSSRRDE
1440
HGPSSHPKPT
1450
SHVSQPHSTN
1460
EYQSVDSVCW
1470
PGHMPPVSTP
1480
VTELSRICSL
1490
VGMPQPDFSF
1500
LRTTQTMTVC
1510
QVKLSNGLLV
1520
HGPQCHSESE
1530
AKERAALFAL
1540
QQLGSLGVNF
1550
PLPPPIFTNY
1560
PPAVPPGAVP
1570
PVFPQPTANM
1580
MPSSSHLFGS
1590
VPWRPPVPVP
1600
GNAYHYPSYP
1610
ATMPLAGGMP
1620
GGVHNQFIPL
1630
QVTKKRVANK
1640
KNFENKEAQS
1650
SQATPLQTNK
1660
PGSSEATRMT
1670
PQEGSPASSA
1680
SSQATQPVSS
1690
HVETASQGHV
1700
VSHQRSAPSS
1710
SRRKSRKLAV
NFSVSKPSE
Gene Ontology
| Classification | GO ID | Description |
|---|---|---|
| Cellular Component | GO:0005737 | cytoplasm |
| Biological Process | GO:0071409 | cellular response to cycloheximide |
| Biological Process | GO:1905795 | cellular response to puromycin |
| Biological Process | GO:0071044 | histone mRNA catabolic process |
| Biological Process | GO:0006402 | mRNA catabolic process |
| Biological Process | GO:0017148 | negative regulation of translation |
| Biological Process | GO:0071028 | nuclear mRNA surveillance |
| Biological Process | GO:0000956 | nuclear-transcribed mRNA catabolic process |
| Biological Process | GO:0033574 | response to testosterone |
| Biological Process | GO:0016075 | rRNA catabolic process |
| Cellular Component | GO:0005829 | cytosol |
| Cellular Component | GO:0030425 | dendrite |
| Cellular Component | GO:0043025 | neuronal cell body |
| Cellular Component | GO:0005634 | nucleus |
| Cellular Component | GO:0000932 | P-body |
| Cellular Component | GO:0005886 | plasma membrane |
| Molecular Function | GO:0004534 | 5'-3' RNA exonuclease activity |
| Molecular Function | GO:0051880 | G-quadruplex DNA binding |
| Molecular Function | GO:0002151 | G-quadruplex RNA binding |
| Molecular Function | GO:0003723 | RNA binding |
| Molecular Function | GO:0070034 | telomerase RNA binding |
Reference
[1] Sheng L, Xu H, Wang Y, Ni J, Xiang T et al.. Systematic analysis of lysine lactylation in nucleus pulposus cells.. iScience 27(11):111157. 2024 Nov 15. PMID: 39524337.