Search Results

Overview

Uniprot IDD4ABN8
Protein Name5'-3' exoribonuclease 1
Gene NameXrn1
OrganismRattus norvegicus

Kla Sites from experimental identification

Position Flanking peptide
752 TQKVYLGKTAPPCKV

Function

No function data available.

Protein Sequence

10 MGVPKFYRWI 20 SERYPCLSEV 30 VKEHQIPEFD 40 NLYLDMNGII 50 HQCSHPNDDD 60 VHFRISDDKI 70 FTDIFHYLEV 80 LFRIIKPRKV 90 FFMAVDGVAP 100 RAKMNQQRGR 110 RFRSAKEAED 120 KIKKAIEKGE 130 TLPTEARFDS 140 NCITPGTEFM 150 ARLHEHLKYF 160 VNMKISTDKS 170 WQGVTIYFSG 180 HETPGEGEHK 190 IMEFIRSEKA 200 KPDHDPNTRH 210 CLYGLDADLI 220 MLGLTSHEAH 230 FSLLREEVRF 240 GGKKTQRVCA 250 PEETTFHLLH 260 LSLMREYIDY 270 EFSALKEKIT 280 FKYDIEKIID 290 DWILMGFLVG 300 NDFIPHLPHL 310 HINHDALPLL 320 YGTYIAILPE 330 LGGYINESGH 340 LNLPRFERYL 350 VKLSDFDREH 360 FSEVFVDLKW 370 FESKVGNKYL 380 NEAAGAAAEE 390 AKSCKDKRKV 400 KGQENSLSWA 410 ALDKREGEGV 420 ASRDNFEDET 430 EDDDLFETEF 440 RQYKRTYYMT 450 KMGVDVVSDE 460 FLADQAACYV 470 QAIQWILHYY 480 YHGVQSWSWY 490 YPYHYAPFLS 500 DIRNISTLKI 510 HFELGKPFKP 520 FEQLLAVLPS 530 ASKTLLPTCY 540 QHLMTSEDSP 550 IIEYYPPDFK 560 TDLNGKQQEW 570 EAVVLIPFID 580 EKRLLEAMET 590 CNHSLKKEER 600 KRNQHSECLM 610 CWYDSDTEFT 620 YSSPWPEKFP 630 AIERCSTRYK 640 IISLDAWRVD 650 INKNKITRVD 660 QKALYFCGFP 670 TLKHIKHKFF 680 LKKSGVQVFQ 690 QSSRGENMML 700 EITVNAEPDE 710 LSIENIASSV 720 LGKSVFVNWP 730 HLEEARVVAV 740 SDGETKFYME 750 EPPGTQKVYL 760 GKTAPPCKVI 770 QLSDKEQSNW 780 TKEIQGISEQ 790 YLRRKGIMIN 800 ETSAVVYAQL 810 LTGRRYQVNQ 820 NGEVRLEKQW 830 SKQSLPFVYQ 840 TIVKDVRAFD 850 SRFSNIKTLD 860 DLFPPRSVVF 870 MLGTPYYGCT 880 GEVQDSGDVI 890 TEGRIRVVFS 900 IPCEPNLDAL 910 IQNQHKYSIK 920 YNPGYVLAGR 930 LGVSGYLVSR 940 FTGSIFIGRG 950 SRRNPHGDHK 960 ANVGLNLKFN 970 KKNEEVPGYT 980 KRVGSEWMYS 990 SAAEQLLAEY 1000 IERAPELFSY 1010 IAQNSQEDVF 1020 YEDDIWPGES 1030 ESGAEKVQEI 1040 ITWLKGHPVS 1050 TLSRSSCDLH 1060 ILDAAIVEKI 1070 EEEVEKCKQR 1080 KNNKKVRVTV 1090 KPHLLFRPLE 1100 QQHGAIPDRD 1110 AEFRLFDRVV 1120 NVRENFSVPV 1130 GLRGTIIGIK 1140 GANREADVLF 1150 EVLFDEEFPG 1160 GLTIRCSPGR 1170 GYRLPTSALV 1180 NLSHGSRCET 1190 GNQKLTAIVK 1200 PQPAVSHCSV 1210 NSSVSSGHMG 1220 GLNHSPQSLF 1230 LPTQVPTKGD 1240 DEFCNIWQSL 1250 QGSGKIQHLQ 1260 PTVQEKGAVL 1270 PQEISQVTES 1280 HKSGFNDHSV 1290 RHQQRKHDPH 1300 RKFKEEYKSP 1310 KAECQNQKLS 1320 NKQTSGASAR 1330 CNIKLLKRNE 1340 SPGTSEAQKV 1350 VTSYPNAVHK 1360 PHSGIESFLA 1370 SLNISKESEV 1380 QLPHGEPPDE 1390 AHLSPQSFAM 1400 KGTRMLKEIL 1410 KIDSPDTTDS 1420 KNDVKKFDNE 1430 VMVSSSRRDE 1440 HGPSSHPKPT 1450 SHVSQPHSTN 1460 EYQSVDSVCW 1470 PGHMPPVSTP 1480 VTELSRICSL 1490 VGMPQPDFSF 1500 LRTTQTMTVC 1510 QVKLSNGLLV 1520 HGPQCHSESE 1530 AKERAALFAL 1540 QQLGSLGVNF 1550 PLPPPIFTNY 1560 PPAVPPGAVP 1570 PVFPQPTANM 1580 MPSSSHLFGS 1590 VPWRPPVPVP 1600 GNAYHYPSYP 1610 ATMPLAGGMP 1620 GGVHNQFIPL 1630 QVTKKRVANK 1640 KNFENKEAQS 1650 SQATPLQTNK 1660 PGSSEATRMT 1670 PQEGSPASSA 1680 SSQATQPVSS 1690 HVETASQGHV 1700 VSHQRSAPSS 1710 SRRKSRKLAV NFSVSKPSE

Gene Ontology

Classification GO ID Description
Cellular Component GO:0005737 cytoplasm
Biological Process GO:0071409 cellular response to cycloheximide
Biological Process GO:1905795 cellular response to puromycin
Biological Process GO:0071044 histone mRNA catabolic process
Biological Process GO:0006402 mRNA catabolic process
Biological Process GO:0017148 negative regulation of translation
Biological Process GO:0071028 nuclear mRNA surveillance
Biological Process GO:0000956 nuclear-transcribed mRNA catabolic process
Biological Process GO:0033574 response to testosterone
Biological Process GO:0016075 rRNA catabolic process
Cellular Component GO:0005829 cytosol
Cellular Component GO:0030425 dendrite
Cellular Component GO:0043025 neuronal cell body
Cellular Component GO:0005634 nucleus
Cellular Component GO:0000932 P-body
Cellular Component GO:0005886 plasma membrane
Molecular Function GO:0004534 5'-3' RNA exonuclease activity
Molecular Function GO:0051880 G-quadruplex DNA binding
Molecular Function GO:0002151 G-quadruplex RNA binding
Molecular Function GO:0003723 RNA binding
Molecular Function GO:0070034 telomerase RNA binding

Reference

[1] Sheng L, Xu H, Wang Y, Ni J, Xiang T et al.. Systematic analysis of lysine lactylation in nucleus pulposus cells.. iScience 27(11):111157. 2024 Nov 15. PMID: 39524337.