Search Results

Overview

Uniprot IDG3V7T6
Protein NameSplicing factor 3B subunit 1
Gene NameSf3b1
OrganismRattus norvegicus

Kla Sites from experimental identification

Position Flanking peptide
195 AASQPPSKRKRRWDQ
213 QTPGATPKKLSSWDQ
214 TPGATPKKLSSWDQA
240 DETPGRAKGSETPGA
333 TPTPGASKRKSRWDE
6 **MAKIAKTHEDIEA

Function

No function data available.

Protein Sequence

10 MAKIAKTHED 20 IEAQIREIQG 30 KKAALDEAQG 40 VGLDSTGYYD 50 QEIYGGSDSR 60 FAGYVTSIAA 70 TELEDDDDDY 80 SSSTSLLGQK 90 KPGYHAPVAL 100 LNDIPQSTEQ 110 YDPFAEHRPP 120 KIADREDEYK 130 KHRRTMIISP 140 ERLDPFADGG 150 KTPDPKMNAR 160 TYMDVMREQH 170 LTKEEREIRQ 180 QLAEKAKAGE 190 LKVVNGAAAS 200 QPPSKRKRRW 210 DQTADQTPGA 220 TPKKLSSWDQ 230 AETPGHTPSL 240 RWDETPGRAK 250 GSETPGATPG 260 SKIWDPTPSH 270 TPAGAATPGR 280 GDTPGHATPG 290 HGGATSSARK 300 NRWDETPKTE 310 RDTPGHGSGW 320 AETPRTDRGG 330 DSIGETPTPG 340 ASKRKSRWDE 350 TPASQMGGST 360 PVLTPGKTPI 370 GTPAMNMATP 380 TPGHIMSMTP 390 EQLQAWRWER 400 EIDERNRPLS 410 DEELDAMFPE 420 GYKVLPPPAG 430 YVPIRTPARK 440 LTATPTPLGG 450 MTGFHMQTED 460 RTMKSVNDQP 470 SGNLPFLKPD 480 DIQYFDKLLV 490 DVDESTLSPE 500 EQKERKIMKL 510 LLKIKNGTPP 520 MRKAALRQIT 530 DKAREFGAGP 540 LFNQILPLLM 550 SPTLEDQERH 560 LLVKVIDRIL 570 YKLDDLVRPY 580 VHKILVVIEP 590 LLIDEDYYAR 600 VEGREIISNL 610 AKAAGLATMI 620 STMRPDIDNM 630 DEYVRNTTAR 640 AFAVVASALG 650 IPSLLPFLKA 660 VCKSKKSWQA 670 RHTGIKIVQQ 680 IAILMGCAIL 690 PHLRSLVEII 700 EHGLVDEQQK 710 VRTISALAIA 720 ALAEAATPYG 730 IESFDSVLKP 740 LWKGIRQHRG 750 KGLAAFLKAI 760 GYLIPLMDAE 770 YANYYTREVM 780 LILIREFQSP 790 DEEMKKIVLK 800 VVKQCCGTDG 810 VEANYIKTEI 820 LPPFFKHFWQ 830 HRMALDRRNY 840 RQLVDTTVEL 850 ANKVGAAEII 860 SRIVDDLKDE 870 AEQYRKMVME 880 TIEKIMGNLG 890 AADIDHKLEE 900 QLIDGILYAF 910 QEQTTEDSVM 920 LNGFGTVVNA 930 LGKRVKPYLP 940 QICGTVLWRL 950 NNKSAKVRQQ 960 AADLISRTAV 970 VMKTCQEEKL 980 MGHLGVVLYE 990 YLGEEYPEVL 1000 GSILGALKAI 1010 VNVIGMHKMT 1020 PPIKDLLPRL 1030 TPILKNRHEK 1040 VQENCIDLVG 1050 RIADRGAEYV 1060 SAREWMRICF 1070 ELLELLKAHK 1080 KAIRRATVNT 1090 FGYIAKAIGP 1100 HDVLATLLNN 1110 LKVQERQNRV 1120 CTTVAIAIVA 1130 ETCSPFTVLP 1140 ALMNEYRVPE 1150 LNVQNGVLKS 1160 LSFLFEYIGE 1170 MGKDYIYAVT 1180 PLLEDALMDR 1190 DLVHRQTASA 1200 VVQHMSLGVY 1210 GFGCEDSLNH 1220 LLNYVWPNVF 1230 ETSPHVIQAV 1240 MGALEGLRVA 1250 IGPCRMLQYC 1260 LQGLFHPARK 1270 VRDVYWKIYN 1280 SIYIGSQDAL 1290 IAHYPRIYND 1300 DKNTYIRYEL DYIL

Gene Ontology

Classification GO ID Description
Cellular Component GO:0110016 B-WICH complex
Cellular Component GO:0071013 catalytic step 2 spliceosome
Cellular Component GO:0000785 chromatin
Cellular Component GO:0016363 nuclear matrix
Cellular Component GO:0016607 nuclear speck
Cellular Component GO:0005634 nucleus
Cellular Component GO:0071011 precatalytic spliceosome
Cellular Component GO:0030532 small nuclear ribonucleoprotein complex
Cellular Component GO:0005681 spliceosomal complex
Cellular Component GO:0034693 U11/U12 snRNP
Cellular Component GO:0071018 U12-type catalytic step 2 spliceosome
Cellular Component GO:0071016 U12-type precatalytic spliceosome
Cellular Component GO:0005689 U12-type spliceosomal complex
Cellular Component GO:0005686 U2 snRNP
Cellular Component GO:0071006 U2-type catalytic step 1 spliceosome
Cellular Component GO:0071005 U2-type precatalytic spliceosome
Cellular Component GO:0071004 U2-type prespliceosome
Cellular Component GO:0005684 U2-type spliceosomal complex
Molecular Function GO:0003682 chromatin binding
Molecular Function GO:0003729 mRNA binding
Molecular Function GO:0036002 pre-mRNA binding
Molecular Function GO:1990935 splicing factor binding
Biological Process GO:0009952 anterior/posterior pattern specification
Biological Process GO:0001825 blastocyst formation
Biological Process GO:0000398 mRNA splicing, via spliceosome
Biological Process GO:0045945 positive regulation of transcription by RNA polymerase III
Biological Process GO:0000245 spliceosomal complex assembly

Reference

[1] Sheng L, Xu H, Wang Y, Ni J, Xiang T et al.. Systematic analysis of lysine lactylation in nucleus pulposus cells.. iScience 27(11):111157. 2024 Nov 15. PMID: 39524337.