Search Results
Overview
| Uniprot ID | H0UVC5 |
|---|---|
| Protein Name | Vimentin |
| Gene Name | VIM |
| Organism | Cavia porcellus |
Kla Sites from experimental identification
| Position | Flanking peptide |
|---|---|
| 105 | RFANYIDKVRFLEQQ |
| 124 | LAELEQLKGQGKSRL |
| 153 | VDQLTNDKARVEVER |
| 173 | DIMRLREKLQEEMLQ |
| 271 | QEAEEWYKSKFADLS |
| 273 | AEEWYKSKFADLSEA |
| 292 | NDALRQAKQESNEYR |
| 418 | PLVDTHSKRTLLIKT |
| 424 | SKRTLLIKTVETRDG |
| 89 | KNTRTNEKVELQELN |
Function
Involved with LARP6 in the stabilization of type I collagen mRNAs for CO1A1 and CO1A2
Protein Sequence
10
MSTRSSSSYR
20
RVRPSFSRSY
30
VTTSTRTYSL
40
GSALRTVYAS
50
SPGGAFVTRS
60
SASRLRSSVP
70
GVRLLQDSVD
80
FSLADAINTE
90
FKNTRTNEKV
100
ELQELNDRFA
110
NYIDKVRFLE
120
QQNKILLAEL
130
EQLKGQGKSR
140
LGDLYEEEMR
150
ELRRQVDQLT
160
NDKARVEVER
170
DNLTEDIMRL
180
REKLQEEMLQ
190
REEAESTLQS
200
FRQVCKVDSP
210
PELPLCSTQL
220
TFCLPVLPQE
230
IQELQAQIQE
240
QHVQIDMDVS
250
KPDLTAALRD
260
VRQQYESVAA
270
KNLQEAEEWY
280
KSKFADLSEA
290
ANRNNDALRQ
300
AKQESNEYRR
310
QVQSLTCEVD
320
ALKGTNESLE
330
RQMREMEENF
340
AVEAANYQDT
350
IGRLQDEIQN
360
MKEEMARHLR
370
EYQDLLNVKM
380
ALDIEIATYR
390
KLLEGEESRI
400
SMPLPNFSSL
410
NLRETNLESL
420
PLVDTHSKRT
430
LLIKTVETRD
440
GQVINETSQH
HDDLE
Gene Ontology
| Classification | GO ID | Description |
|---|---|---|
| Cellular Component | GO:0030424 | axon |
| Cellular Component | GO:0005882 | intermediate filament |
| Cellular Component | GO:0016363 | nuclear matrix |
| Cellular Component | GO:0005777 | peroxisome |
| Cellular Component | GO:0045335 | phagocytic vesicle |
| Cellular Component | GO:0005886 | plasma membrane |
| Molecular Function | GO:0003725 | double-stranded RNA binding |
| Molecular Function | GO:0042802 | identical protein binding |
| Molecular Function | GO:1990254 | keratin filament binding |
| Molecular Function | GO:0019904 | protein domain specific binding |
| Molecular Function | GO:0097110 | scaffold protein binding |
| Molecular Function | GO:0005200 | structural constituent of cytoskeleton |
| Molecular Function | GO:0005212 | structural constituent of eye lens |
| Biological Process | GO:0071222 | cellular response to lipopolysaccharide |
| Biological Process | GO:0071225 | cellular response to muramyl dipeptide |
| Biological Process | GO:0045109 | intermediate filament organization |
| Biological Process | GO:0032967 | positive regulation of collagen biosynthetic process |
| Biological Process | GO:0010628 | positive regulation of gene expression |
| Biological Process | GO:0043488 | regulation of mRNA stability |
| Cellular Component | GO:0031252 | cell leading edge |
| Cellular Component | GO:0005829 | cytosol |
Reference
[1] Feng J, Chen X, Li R, Xie Y, Zhang X et al.. Lactylome analysis reveals potential target modified proteins in the retina of form-deprivation myopia.. iScience 27(9):110606. 2024 Sep 20. PMID: 39246443.