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Overview

Uniprot IDO08837
Protein NameCell division cycle 5-like protein
Gene NameCdc5l
OrganismRattus norvegicus

Kla Sites from experimental identification

Position Flanking peptide
290 SGVSEFTKKRSKLVL

Function

DNA-binding protein involved in cell cycle control. May act as a transcription activator. Plays a role in pre-mRNA splicing as core component of precatalytic, catalytic and postcatalytic spliceosomal complexes. Component of the PRP19-CDC5L complex that forms an integral part of the spliceosome and is required for activating pre-mRNA splicing. The PRP19-CDC5L complex may also play a role in the response to DNA damage (DDR). As a component of the minor spliceosome, involved in the splicing of U12-type introns in pre-mRNAs

Protein Sequence

10 MPRIMIKGGV 20 WRNTEDEILK 30 AAVMKYGKNQ 40 WSRIASLLHR 50 KSAKQCKARW 60 YEWLDPSIKK 70 TEWSREEEEK 80 LLHLAKLMPT 90 QWRTIAPIIG 100 RTAAQCLEHY 110 EFLLDKTAQR 120 DNEEETTDDP 130 RKLKPGEIDP 140 NPETKPARPD 150 PIDMDEDELE 160 MLSEARARLA 170 NTQGKKAKRK 180 AREKQLEEAR 190 RLAALQKRRE 200 LRAAGIEIQK 210 KRKKKRGVDY 220 NAEIPFEKKP 230 ALGFYDTSEE 240 NYQALDADFR 250 KLRQQDLDGE 260 LRSEKEGRDR 270 KKDKQHLKRK 280 KESDLPSAIL 290 QTSGVSEFTK 300 KRSKLVLPAP 310 QISDAELQEV 320 VKVGQASEVA 330 RQTAEESGIT 340 NSASSTLLSE 350 YNVTNNSIAL 360 RTPRTPASQD 370 RILQEAQNLM 380 ALTNVDTPLK 390 GGLNTPLHES 400 DFSGVTPQRQ 410 VVQTPNTVLS 420 TPFRTPSNGA 430 EGLTPRSGTT 440 PKPVTNATPG 450 RTPLRDKLNI 460 NPEDGMADYS 470 DPSYVKQMER 480 ESREHLRLGL 490 LGLPAPKNDF 500 EIVLPENAEK 510 ELEEREMDDT 520 YIEDAADVDA 530 RKQAIRDAER 540 VKEMKRMHKA 550 VQKDLPRPSE 560 VNETILRPLN 570 VEPPLTDLQK 580 SEELIKKEMI 590 TMLHYDLLHH 600 PYEPSGNKKG 610 KNVGFATNNS 620 EHITYLEHSP 630 YEKFSKEDLK 640 KAQDVLVQEM 650 EVVKQGMSHG 660 ELSSEAYNQV 670 WEECYSQVLY 680 LPAQSRYTRA 690 NLASKKDRIE 700 SLEKRLEINR 710 GHMTTEAKRA 720 AKMEKKMKIL 730 LGGYQSRAMG 740 LLKQLNDLWD 750 QIEQAHLELR 760 TFEELKKHED 770 SAIPRRLECL 780 KEDVQRQQER 790 EKELQQRYAD 800 LLMEKETLQA KF

Gene Ontology

Classification GO ID Description
Cellular Component GO:0071013 catalytic step 2 spliceosome
Molecular Function GO:0008157 protein phosphatase 1 binding
Molecular Function GO:0003723 RNA binding
Molecular Function GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding
Molecular Function GO:0001222 transcription corepressor binding
Molecular Function GO:0071987 WD40-repeat domain binding
Biological Process GO:0044344 cellular response to fibroblast growth factor stimulus
Biological Process GO:0071352 cellular response to interleukin-2
Biological Process GO:1990090 cellular response to nerve growth factor stimulus
Biological Process GO:1990646 cellular response to prolactin
Biological Process GO:1904568 cellular response to wortmannin
Biological Process GO:0000077 DNA damage checkpoint signaling
Biological Process GO:0006281 DNA repair
Biological Process GO:0006351 DNA-templated transcription
Biological Process GO:0000086 G2/M transition of mitotic cell cycle
Biological Process GO:0000398 mRNA splicing, via spliceosome
Biological Process GO:0045944 positive regulation of transcription by RNA polymerase II
Biological Process GO:0006355 regulation of DNA-templated transcription
Biological Process GO:0006357 regulation of transcription by RNA polymerase II
Cellular Component GO:0005737 cytoplasm
Cellular Component GO:0005662 DNA replication factor A complex
Cellular Component GO:0016607 nuclear speck
Cellular Component GO:0005654 nucleoplasm
Cellular Component GO:0005634 nucleus
Cellular Component GO:0048471 perinuclear region of cytoplasm
Cellular Component GO:0071014 post-mRNA release spliceosomal complex
Cellular Component GO:0071020 post-spliceosomal complex
Cellular Component GO:0032993 protein-DNA complex
Cellular Component GO:0000974 Prp19 complex
Cellular Component GO:0005681 spliceosomal complex
Cellular Component GO:0071018 U12-type catalytic step 2 spliceosome
Cellular Component GO:0071006 U2-type catalytic step 1 spliceosome
Cellular Component GO:0071007 U2-type catalytic step 2 spliceosome
Molecular Function GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific
Molecular Function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
Molecular Function GO:0042802 identical protein binding
Molecular Function GO:0043522 leucine zipper domain binding
Molecular Function GO:0019901 protein kinase binding

Reference

[1] Sheng L, Xu H, Wang Y, Ni J, Xiang T et al.. Systematic analysis of lysine lactylation in nucleus pulposus cells.. iScience 27(11):111157. 2024 Nov 15. PMID: 39524337.