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Overview

Uniprot IDO15213
Protein NameWD repeat-containing protein 46
Gene NameWDR46
OrganismHomo sapiens

Kla Sites from experimental identification

Position Flanking peptide
65 PKNAYILKKSRISKK
66 KNAYILKKSRISKKP

Function

Scaffold component of the nucleolar structure. Required for localization of DDX21 and NCL to the granular compartment of the nucleolus (PubMed:23848194). Part of the small subunit (SSU) processome, first precursor of the small eukaryotic ribosomal subunit. During the assembly of the SSU processome in the nucleolus, many ribosome biogenesis factors, an RNA chaperone and ribosomal proteins associate with the nascent pre-rRNA and work in concert to generate RNA folding, modifications, rearrangements and cleavage as well as targeted degradation of pre-ribosomal RNA by the RNA exosome (PubMed:34516797)

Protein Sequence

10 METAPKPGKD 20 VPPKKDKLQT 30 KRKKPRRYWE 40 EETVPTTAGA 50 SPGPPRNKKN 60 RELRPQRPKN 70 AYILKKSRIS 80 KKPQVPKKPR 90 EWKNPESQRG 100 LSGTQDPFPG 110 PAPVPVEVVQ 120 KFCRIDKSRK 130 LPHSKAKTRS 140 RLEVAEAEEE 150 ETSIKAARSE 160 LLLAEEPGFL 170 EGEDGEDTAK 180 ICQADIVEAV 190 DIASAAKHFD 200 LNLRQFGPYR 210 LNYSRTGRHL 220 AFGGRRGHVA 230 ALDWVTKKLM 240 CEINVMEAVR 250 DIRFLHSEAL 260 LAVAQNRWLH 270 IYDNQGIELH 280 CIRRCDRVTR 290 LEFLPFHFLL 300 ATASETGFLT 310 YLDVSVGKIV 320 AALNARAGRL 330 DVMSQNPYNA 340 VIHLGHSNGT 350 VSLWSPAMKE 360 PLAKILCHRG 370 GVRAVAVDST 380 GTYMATSGLD 390 HQLKIFDLRG 400 TYQPLSTRTL 410 PHGAGHLAFS 420 QRGLLVAGMG 430 DVVNIWAGQG 440 KASPPSLEQP 450 YLTHRLSGPV 460 HGLQFCPFED 470 VLGVGHTGGI 480 TSMLVPGAGE 490 PNFDGLESNP 500 YRSRKQRQEW 510 EVKALLEKVP 520 AELICLDPRA 530 LAEVDVISLE 540 QGKKEQIERL 550 GYDPQAKAPF 560 QPKPKQKGRS 570 STASLVKRKR 580 KVMDEEHRDK 590 VRQSLQQQHH 600 KEAKAKPTGA 610 RPSALDRFVR

Gene Ontology

Classification GO ID Description
Cellular Component GO:0005730 nucleolus
Cellular Component GO:0005654 nucleoplasm
Cellular Component GO:0032040 small-subunit processome
Molecular Function GO:0003723 RNA binding
Biological Process GO:0030490 maturation of SSU-rRNA
Biological Process GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Biological Process GO:0042274 ribosomal small subunit biogenesis

Reference

[1] Wu Q, Li Z, Gong T, Zheng X, Zhou X et al.. Porphyromonas gingivalis infection induces lysine lactylation reprogramming in human umbilical vein endothelial cells.. Front Cell Infect Microbiol 16:1706727. 2026. PMID: 41696360.