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Overview

Uniprot IDO95989
Protein NameDiphosphoinositol polyphosphate phosphohydrolase 1
Gene NameNUDT3
OrganismHomo sapiens

Kla Sites from experimental identification

Position Flanking peptide
5 ***MMKLKSNQTRTY

Function

Cleaves a beta-phosphate from the diphosphate groups in PP-InsP5 (diphosphoinositol pentakisphosphate) and [PP]2-InsP4 (bisdiphosphoinositol tetrakisphosphate), suggesting that it may play a role in signal transduction (PubMed:10585413, PubMed:12370170, PubMed:9822604). InsP6 (inositol hexakisphosphate) is not a substrate (PubMed:9822604). Acts as a negative regulator of the ERK1/2 pathway (By similarity). Also able to catalyze the hydrolysis of dinucleoside oligophosphates, with diadenosine 5',5'''-P1,P6-hexaphosphate (Ap6A) and diadenosine 5',5'''- P1,P5-pentaphosphate (Ap5A) being the preferred substrates (PubMed:10419486, PubMed:12370170). The major reaction products are ADP and p4a from Ap6A and ADP and ATP from Ap5A (PubMed:12370170). Also able to hydrolyze 5-phosphoribose 1-diphosphate (PubMed:12370170). Acts as a decapping enzyme that modulates the stability of a subset of mRNAs implicated in cell motility (PubMed:26932476). Hydrolyzes monomethylated capped RNA after both the alpha- and beta-phosphates generating m7GMP + ppRNA and m7GDP + pRNA (PubMed:32727897). Can hydrolyze unmethylated capped RNAs (By similarity). Divalent cations zinc, magnesium and manganese determine its substrate specificity (PubMed:34788624). Exhibits diphosphoinositol polyphosphate phosphohydrolase in the presence of magnesium ions, diadenosine hexaphosphate hydrolase activity in the presence of manganese ions and endopolyphosphatase activity in the presence of zinc ions (PubMed:34788624). Plays an important role in limiting DNA damage and maintaining cell survival upon oxidative stress via its endopolyphosphatase activity (PubMed:34788624)

Protein Sequence

10 MMKLKSNQTR 20 TYDGDGYKKR 30 AACLCFRSES 40 EEEVLLVSSS 50 RHPDRWIVPG 60 GGMEPEEEPS 70 VAAVREVCEE 80 AGVKGTLGRL 90 VGIFENQERK 100 HRTYVYVLIV 110 TEVLEDWEDS 120 VNIGRKREWF 130 KIEDAIKVLQ 140 YHKPVQASYF 150 ETLRQGYSAN 160 NGTPVVATTY 170 SVSAQSSMSG IR

Gene Ontology

Classification GO ID Description
Cellular Component GO:0005737 cytoplasm
Cellular Component GO:0005829 cytosol
Cellular Component GO:0098978 glutamatergic synapse
Cellular Component GO:0005634 nucleus
Molecular Function GO:0140932 5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase activity
Molecular Function GO:0140933 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity
Molecular Function GO:0034431 bis(5'-adenosyl)-hexaphosphatase activity
Molecular Function GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity
Molecular Function GO:0008486 diphosphoinositol-polyphosphate diphosphatase activity
Molecular Function GO:0000298 endopolyphosphatase activity
Molecular Function GO:0052842 inositol diphosphate pentakisphosphate diphosphatase activity
Molecular Function GO:0052840 inositol diphosphate tetrakisphosphate diphosphatase activity
Molecular Function GO:0052848 inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity
Molecular Function GO:0052845 inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity
Molecular Function GO:0000287 magnesium ion binding
Molecular Function GO:0030145 manganese ion binding
Molecular Function GO:0008270 zinc ion binding
Biological Process GO:1901911 adenosine 5'-(hexahydrogen pentaphosphate) catabolic process
Biological Process GO:0007267 cell-cell signaling
Biological Process GO:1901909 diadenosine hexaphosphate catabolic process
Biological Process GO:1901907 diadenosine pentaphosphate catabolic process
Biological Process GO:0015961 diadenosine polyphosphate catabolic process
Biological Process GO:0071544 diphosphoinositol polyphosphate catabolic process
Biological Process GO:0071543 diphosphoinositol polyphosphate metabolic process
Biological Process GO:0110154 RNA decapping

Reference

[1] Hong H, Chen X, Wang H, Gu X, Yuan Y et al.. Global profiling of protein lysine lactylation and potential target modified protein analysis in hepatocellular carcinoma.. Proteomics 23(9):e2200432. 2023 May. PMID: 36625413.