Search Results

Overview

Uniprot IDP02649
Protein NameApolipoprotein E
Gene NameAPOE
OrganismHomo sapiens

Kla Sites from experimental identification

Position Flanking peptide
113 ETRARLSKELQAAQA
251 RDRLDEVKEQVAEVR
260 QVAEVRAKLEEQAQQ
87 ALMDETMKELKAYKS
93 MKELKAYKSELEEQL

Function

APOE is an apolipoprotein, a protein associating with lipid particles, that mainly functions in lipoprotein-mediated lipid transport between organs via the plasma and interstitial fluids (PubMed:14754908, PubMed:1911868, PubMed:6860692). APOE is a core component of plasma lipoproteins and is involved in their production, conversion and clearance (PubMed:14754908, PubMed:1911868, PubMed:1917954, PubMed:23620513, PubMed:2762297, PubMed:6860692, PubMed:9395455). Apolipoproteins are amphipathic molecules that interact both with lipids of the lipoprotein particle core and the aqueous environment of the plasma (PubMed:2762297, PubMed:6860692, PubMed:9395455). As such, APOE associates with chylomicrons, chylomicron remnants, very low density lipoproteins (VLDL) and intermediate density lipoproteins (IDL) but shows a preferential binding to high-density lipoproteins (HDL) (PubMed:1911868, PubMed:6860692). It also binds a wide range of cellular receptors including the LDL receptor/LDLR, the LDL receptor-related proteins LRP1, LRP2 and LRP8 and the very low-density lipoprotein receptor/VLDLR that mediate the cellular uptake of the APOE-containing lipoprotein particles (PubMed:12950167, PubMed:1530612, PubMed:1917954, PubMed:20030366, PubMed:20303980, PubMed:2063194, PubMed:2762297, PubMed:7635945, PubMed:7768901, PubMed:8756331, PubMed:8939961). Finally, APOE also has a heparin-binding activity and binds heparan-sulfate proteoglycans on the surface of cells, a property that supports the capture and the receptor-mediated uptake of APOE-containing lipoproteins by cells (PubMed:23676495, PubMed:7635945, PubMed:9395455, PubMed:9488694). A main function of APOE is to mediate lipoprotein clearance through the uptake of chylomicrons, VLDLs, and HDLs by hepatocytes (PubMed:1911868, PubMed:1917954, PubMed:23676495, PubMed:29516132, PubMed:9395455). APOE is also involved in the biosynthesis by the liver of VLDLs as well as their uptake by peripheral tissues ensuring the delivery of triglycerides and energy storage in muscle, heart and adipose tissues (PubMed:2762297, PubMed:29516132). By participating in the lipoprotein-mediated distribution of lipids among tissues, APOE plays a critical role in plasma and tissues lipid homeostasis (PubMed:1917954, PubMed:2762297, PubMed:29516132). APOE is also involved in two steps of reverse cholesterol transport, the HDLs-mediated transport of cholesterol from peripheral tissues to the liver, and thereby plays an important role in cholesterol homeostasis (PubMed:14754908, PubMed:23620513, PubMed:9395455). First, it is functionally associated with ABCA1 in the biogenesis of HDLs in tissues (PubMed:14754908, PubMed:23620513). Second, it is enriched in circulating HDLs and mediates their uptake by hepatocytes (PubMed:9395455). APOE also plays an important role in lipid transport in the central nervous system, regulating neuron survival and sprouting (PubMed:25173806, PubMed:8939961). APOE is also involved in innate and adaptive immune responses, controlling for instance the survival of myeloid-derived suppressor cells (By similarity). Binds to the immune cell receptor LILRB4 (PubMed:30333625). APOE may also play a role in transcription regulation through a receptor-dependent and cholesterol-independent mechanism, that activates MAP3K12 and a non-canonical MAPK signal transduction pathway that results in enhanced AP-1-mediated transcription of APP (PubMed:28111074)

Protein Sequence

10 MKVLWAALLV 20 TFLAGCQAKV 30 EQAVETEPEP 40 ELRQQTEWQS 50 GQRWELALGR 60 FWDYLRWVQT 70 LSEQVQEELL 80 SSQVTQELRA 90 LMDETMKELK 100 AYKSELEEQL 110 TPVAEETRAR 120 LSKELQAAQA 130 RLGADMEDVC 140 GRLVQYRGEV 150 QAMLGQSTEE 160 LRVRLASHLR 170 KLRKRLLRDA 180 DDLQKRLAVY 190 QAGAREGAER 200 GLSAIRERLG 210 PLVEQGRVRA 220 ATVGSLAGQP 230 LQERAQAWGE 240 RLRARMEEMG 250 SRTRDRLDEV 260 KEQVAEVRAK 270 LEEQAQQIRL 280 QAEAFQARLK 290 SWFEPLVEDM 300 QRQWAGLVEK 310 VQAAVGTSAA PVPSDNH

Gene Ontology

Classification GO ID Description
Cellular Component GO:0072562 blood microparticle
Cellular Component GO:0042627 chylomicron
Cellular Component GO:0034360 chylomicron remnant
Cellular Component GO:0030669 clathrin-coated endocytic vesicle membrane
Cellular Component GO:0005737 cytoplasm
Cellular Component GO:0030425 dendrite
Cellular Component GO:0034365 discoidal high-density lipoprotein particle
Cellular Component GO:0005769 early endosome
Cellular Component GO:0071682 endocytic vesicle lumen
Cellular Component GO:0005783 endoplasmic reticulum
Cellular Component GO:0005788 endoplasmic reticulum lumen
Cellular Component GO:0070062 extracellular exosome
Cellular Component GO:0031012 extracellular matrix
Cellular Component GO:0005576 extracellular region
Cellular Component GO:0005615 extracellular space
Cellular Component GO:1903561 extracellular vesicle
Cellular Component GO:0098978 glutamatergic synapse
Cellular Component GO:0005794 Golgi apparatus
Cellular Component GO:0034364 high-density lipoprotein particle
Cellular Component GO:0034363 intermediate-density lipoprotein particle
Cellular Component GO:1990777 lipoprotein particle
Cellular Component GO:0034362 low-density lipoprotein particle
Cellular Component GO:0042470 melanosome
Cellular Component GO:0016020 membrane
Cellular Component GO:0097487 multivesicular body, internal vesicle
Cellular Component GO:0043025 neuronal cell body
Cellular Component GO:0005634 nucleus
Cellular Component GO:0005886 plasma membrane
Cellular Component GO:0043083 synaptic cleft
Cellular Component GO:0034361 very-low-density lipoprotein particle
Molecular Function GO:0001540 amyloid-beta binding
Molecular Function GO:0016209 antioxidant activity
Molecular Function GO:0120020 cholesterol transfer activity
Molecular Function GO:0019899 enzyme binding
Molecular Function GO:0043395 heparan sulfate proteoglycan binding
Molecular Function GO:0008201 heparin binding
Molecular Function GO:0042802 identical protein binding
Molecular Function GO:0008289 lipid binding
Molecular Function GO:0005319 lipid transporter activity
Molecular Function GO:0071813 lipoprotein particle binding
Molecular Function GO:0050750 low-density lipoprotein particle receptor binding
Molecular Function GO:0046911 metal chelating activity
Molecular Function GO:0060228 phosphatidylcholine-sterol O-acyltransferase activator activity
Molecular Function GO:0005543 phospholipid binding
Molecular Function GO:0046983 protein dimerization activity
Molecular Function GO:0042803 protein homodimerization activity
Molecular Function GO:0044877 protein-containing complex binding
Molecular Function GO:0048018 receptor ligand activity
Molecular Function GO:0005102 signaling receptor binding
Molecular Function GO:0005198 structural molecule activity
Molecular Function GO:0048156 tau protein binding
Molecular Function GO:0070326 very-low-density lipoprotein particle receptor binding
Biological Process GO:0055090 acylglycerol homeostasis
Biological Process GO:0097113 AMPA glutamate receptor clustering
Biological Process GO:0042982 amyloid precursor protein metabolic process
Biological Process GO:0071402 cellular response to lipoprotein particle stimulus
Biological Process GO:0033344 cholesterol efflux
Biological Process GO:0042632 cholesterol homeostasis
Biological Process GO:0008203 cholesterol metabolic process
Biological Process GO:0034382 chylomicron remnant clearance
Biological Process GO:0007010 cytoskeleton organization
Biological Process GO:0055089 fatty acid homeostasis
Biological Process GO:0007186 G protein-coupled receptor signaling pathway
Biological Process GO:0034380 high-density lipoprotein particle assembly
Biological Process GO:0034384 high-density lipoprotein particle clearance
Biological Process GO:0034375 high-density lipoprotein particle remodeling
Biological Process GO:0044794 host-mediated activation of viral process
Biological Process GO:0071831 intermediate-density lipoprotein particle clearance
Biological Process GO:0046907 intracellular transport
Biological Process GO:0010877 lipid transport involved in lipid storage
Biological Process GO:0042158 lipoprotein biosynthetic process
Biological Process GO:0035641 locomotory exploration behavior
Biological Process GO:0015909 long-chain fatty acid transport
Biological Process GO:0007616 long-term memory
Biological Process GO:0034374 low-density lipoprotein particle remodeling
Biological Process GO:0032438 melanosome organization
Biological Process GO:1905907 negative regulation of amyloid fibril formation
Biological Process GO:1902430 negative regulation of amyloid-beta formation
Biological Process GO:0030195 negative regulation of blood coagulation
Biological Process GO:0043537 negative regulation of blood vessel endothelial cell migration
Biological Process GO:0090090 negative regulation of canonical Wnt signaling pathway
Biological Process GO:0045541 negative regulation of cholesterol biosynthetic process
Biological Process GO:0010596 negative regulation of endothelial cell migration
Biological Process GO:0001937 negative regulation of endothelial cell proliferation
Biological Process GO:0010629 negative regulation of gene expression
Biological Process GO:0050728 negative regulation of inflammatory response
Biological Process GO:1900272 negative regulation of long-term synaptic potentiation
Biological Process GO:0043409 negative regulation of MAPK cascade
Biological Process GO:0010977 negative regulation of neuron projection development
Biological Process GO:0010544 negative regulation of platelet activation
Biological Process GO:0010642 negative regulation of platelet-derived growth factor receptor signaling pathway
Biological Process GO:0051248 negative regulation of protein metabolic process
Biological Process GO:0050709 negative regulation of protein secretion
Biological Process GO:0048662 negative regulation of smooth muscle cell proliferation
Biological Process GO:0031175 neuron projection development
Biological Process GO:0038060 nitric oxide-cGMP-mediated signaling
Biological Process GO:0097114 NMDA glutamate receptor clustering
Biological Process GO:0033700 phospholipid efflux
Biological Process GO:1905908 positive regulation of amyloid fibril formation
Biological Process GO:1900223 positive regulation of amyloid-beta clearance
Biological Process GO:0010875 positive regulation of cholesterol efflux
Biological Process GO:0090205 positive regulation of cholesterol metabolic process
Biological Process GO:0060999 positive regulation of dendritic spine development
Biological Process GO:1902952 positive regulation of dendritic spine maintenance
Biological Process GO:0045893 positive regulation of DNA-templated transcription
Biological Process GO:0045807 positive regulation of endocytosis
Biological Process GO:0070374 positive regulation of ERK1 and ERK2 cascade
Biological Process GO:0046889 positive regulation of lipid biosynthetic process
Biological Process GO:1903002 positive regulation of lipid transport across blood-brain barrier
Biological Process GO:0140077 positive regulation of lipoprotein transport
Biological Process GO:0032805 positive regulation of low-density lipoprotein particle receptor catabolic process
Biological Process GO:0051044 positive regulation of membrane protein ectodomain proteolysis
Biological Process GO:0010976 positive regulation of neuron projection development
Biological Process GO:0045429 positive regulation of nitric oxide biosynthetic process
Biological Process GO:1902995 positive regulation of phospholipid efflux
Biological Process GO:0017038 protein import
Biological Process GO:0006898 receptor-mediated endocytosis
Biological Process GO:1905906 regulation of amyloid fibril formation
Biological Process GO:1902991 regulation of amyloid precursor protein catabolic process
Biological Process GO:1900221 regulation of amyloid-beta clearance
Biological Process GO:0042981 regulation of apoptotic process
Biological Process GO:0030516 regulation of axon extension
Biological Process GO:2000822 regulation of behavioral fear response
Biological Process GO:0032489 regulation of Cdc42 protein signal transduction
Biological Process GO:1905890 regulation of cellular response to very-low-density lipoprotein particle stimulus
Biological Process GO:0090181 regulation of cholesterol metabolic process
Biological Process GO:0045088 regulation of innate immune response
Biological Process GO:0048168 regulation of neuronal synaptic plasticity
Biological Process GO:0061136 regulation of proteasomal protein catabolic process
Biological Process GO:0051246 regulation of protein metabolic process
Biological Process GO:0043254 regulation of protein-containing complex assembly
Biological Process GO:0061771 response to caloric restriction
Biological Process GO:0000302 response to reactive oxygen species
Biological Process GO:0001523 retinoid metabolic process
Biological Process GO:0043691 reverse cholesterol transport
Biological Process GO:0007271 synaptic transmission, cholinergic
Biological Process GO:0070328 triglyceride homeostasis
Biological Process GO:0006641 triglyceride metabolic process
Biological Process GO:0071830 triglyceride-rich lipoprotein particle clearance
Biological Process GO:0034447 very-low-density lipoprotein particle clearance
Biological Process GO:0034372 very-low-density lipoprotein particle remodeling
Biological Process GO:0019068 virion assembly

Reference

[1] Yang Z, Yan C, Ma J, Peng P, Ren X et al.. Lactylome analysis suggests lactylation-dependent mechanisms of metabolic adaptation in hepatocellular carcinoma.. Nat Metab 5(1):61-79. 2023 Jan. PMID: 36593272.

[2] Lin Y, Chen M, Wang D, Yu Y, Chen R et al.. Multi-Proteomic Analysis Reveals the Effect of Protein Lactylation on Matrix and Cholesterol Metabolism in Tendinopathy.. J Proteome Res 22(6):1712-1722. 2023 Jun 2. PMID: 37159428.

[3] Yang YH, Wang QC, Kong J, Yang JT, Liu JF. Global profiling of lysine lactylation in human lungs.. Proteomics 23(15):e2200437. 2023 Aug. PMID: 37170646.