Search Results

Overview

Uniprot IDP20908
Protein NameCollagen alpha-1(V) chain
Gene NameCOL5A1
OrganismHomo sapiens

Kla Sites from experimental identification

Position Flanking peptide
582 PPGSGGLKGEPGDVG

Function

Type V collagen is a member of group I collagen (fibrillar forming collagen). It is a minor connective tissue component of nearly ubiquitous distribution. Type V collagen binds to DNA, heparan sulfate, thrombospondin, heparin, and insulin

Protein Sequence

10 MDVHTRWKAR 20 SALRPGAPLL 30 PPLLLLLLWA 40 PPPSRAAQPA 50 DLLKVLDFHN 60 LPDGITKTTG 70 FCATRRSSKG 80 PDVAYRVTKD 90 AQLSAPTKQL 100 YPASAFPEDF 110 SILTTVKAKK 120 GSQAFLVSIY 130 NEQGIQQIGL 140 ELGRSPVFLY 150 EDHTGKPGPE 160 DYPLFRGINL 170 SDGKWHRIAL 180 SVHKKNVTLI 190 LDCKKKTTKF 200 LDRSDHPMID 210 INGIIVFGTR 220 ILDEEVFEGD 230 IQQLLFVSDH 240 RAAYDYCEHY 250 SPDCDTAVPD 260 TPQSQDPNPD 270 EYYTEGDGEG 280 ETYYYEYPYY 290 EDPEDLGKEP 300 TPSKKPVEAA 310 KETTEVPEEL 320 TPTPTEAAPM 330 PETSEGAGKE 340 EDVGIGDYDY 350 VPSEDYYTPS 360 PYDDLTYGEG 370 EENPDQPTDP 380 GAGAEIPTST 390 ADTSNSSNPA 400 PPPGEGADDL 410 EGEFTEETIR 420 NLDENYYDPY 430 YDPTSSPSEI 440 GPGMPANQDT 450 IYEGIGGPRG 460 EKGQKGEPAI 470 IEPGMLIEGP 480 PGPEGPAGLP 490 GPPGTMGPTG 500 QVGDPGERGP 510 PGRPGLPGAD 520 GLPGPPGTML 530 MLPFRFGGGG 540 DAGSKGPMVS 550 AQESQAQAIL 560 QQARLALRGP 570 AGPMGLTGRP 580 GPVGPPGSGG 590 LKGEPGDVGP 600 QGPRGVQGPP 610 GPAGKPGRRG 620 RAGSDGARGM 630 PGQTGPKGDR 640 GFDGLAGLPG 650 EKGHRGDPGP 660 SGPPGPPGDD 670 GERGDDGEVG 680 PRGLPGEPGP 690 RGLLGPKGPP 700 GPPGPPGVTG 710 MDGQPGPKGN 720 VGPQGEPGPP 730 GQQGNPGAQG 740 LPGPQGAIGP 750 PGEKGPLGKP 760 GLPGMPGADG 770 PPGHPGKEGP 780 PGEKGGQGPP 790 GPQGPIGYPG 800 PRGVKGADGI 810 RGLKGTKGEK 820 GEDGFPGFKG 830 DMGIKGDRGE 840 IGPPGPRGED 850 GPEGPKGRGG 860 PNGDPGPLGP 870 PGEKGKLGVP 880 GLPGYPGRQG 890 PKGSIGFPGF 900 PGANGEKGGR 910 GTPGKPGPRG 920 QRGPTGPRGE 930 RGPRGITGKP 940 GPKGNSGGDG 950 PAGPPGERGP 960 NGPQGPTGFP 970 GPKGPPGPPG 980 KDGLPGHPGQ 990 RGETGFQGKT 1000 GPPGPPGVVG 1010 PQGPTGETGP 1020 MGERGHPGPP 1030 GPPGEQGLPG 1040 LAGKEGTKGD 1050 PGPAGLPGKD 1060 GPPGLRGFPG 1070 DRGLPGPVGA 1080 LGLKGNEGPP 1090 GPPGPAGSPG 1100 ERGPAGAAGP 1110 IGIPGRPGPQ 1120 GPPGPAGEKG 1130 APGEKGPQGP 1140 AGRDGLQGPV 1150 GLPGPAGPVG 1160 PPGEDGDKGE 1170 IGEPGQKGSK 1180 GDKGEQGPPG 1190 PTGPQGPIGQ 1200 PGPSGADGEP 1210 GPRGQQGLFG 1220 QKGDEGPRGF 1230 PGPPGPVGLQ 1240 GLPGPPGEKG 1250 ETGDVGQMGP 1260 PGPPGPRGPS 1270 GAPGADGPQG 1280 PPGGIGNPGA 1290 VGEKGEPGEA 1300 GEPGLPGEGG 1310 PPGPKGERGE 1320 KGESGPSGAA 1330 GPPGPKGPPG 1340 DDGPKGSPGP 1350 VGFPGDPGPP 1360 GEPGPAGQDG 1370 PPGDKGDDGE 1380 PGQTGSPGPT 1390 GEPGPSGPPG 1400 KRGPPGPAGP 1410 EGRQGEKGAK 1420 GEAGLEGPPG 1430 KTGPIGPQGA 1440 PGKPGPDGLR 1450 GIPGPVGEQG 1460 LPGSPGPDGP 1470 PGPMGPPGLP 1480 GLKGDSGPKG 1490 EKGHPGLIGL 1500 IGPPGEQGEK 1510 GDRGLPGPQG 1520 SSGPKGEQGI 1530 TGPSGPIGPP 1540 GPPGLPGPPG 1550 PKGAKGSSGP 1560 TGPKGEAGHP 1570 GPPGPPGPPG 1580 EVIQPLPIQA 1590 SRTRRNIDAS 1600 QLLDDGNGEN 1610 YVDYADGMEE 1620 IFGSLNSLKL 1630 EIEQMKRPLG 1640 TQQNPARTCK 1650 DLQLCHPDFP 1660 DGEYWVDPNQ 1670 GCSRDSFKVY 1680 CNFTAGGSTC 1690 VFPDKKSEGA 1700 RITSWPKENP 1710 GSWFSEFKRG 1720 KLLSYVDAEG 1730 NPVGVVQMTF 1740 LRLLSASAHQ 1750 NVTYHCYQSV 1760 AWQDAATGSY 1770 DKALRFLGSN 1780 DEEMSYDNNP 1790 YIRALVDGCA 1800 TKKGYQKTVL 1810 EIDTPKVEQV 1820 PIVDIMFNDF 1830 GEASQKFGFE VGPACFMG

Gene Ontology

Classification GO ID Description
Cellular Component GO:0005604 basement membrane
Cellular Component GO:0005588 collagen type V trimer
Cellular Component GO:0005592 collagen type XI trimer
Cellular Component GO:0005788 endoplasmic reticulum lumen
Cellular Component GO:0031012 extracellular matrix
Cellular Component GO:0005576 extracellular region
Molecular Function GO:0030020 extracellular matrix structural constituent conferring tensile strength
Molecular Function GO:0008201 heparin binding
Molecular Function GO:0005178 integrin binding
Molecular Function GO:0046872 metal ion binding
Molecular Function GO:0048407 platelet-derived growth factor binding
Molecular Function GO:0043394 proteoglycan binding
Biological Process GO:0007155 cell adhesion
Biological Process GO:0016477 cell migration
Biological Process GO:0032964 collagen biosynthetic process
Biological Process GO:0030199 collagen fibril organization
Biological Process GO:0048592 eye morphogenesis
Biological Process GO:0045112 integrin biosynthetic process
Biological Process GO:1903225 negative regulation of endodermal cell differentiation
Biological Process GO:0048705 skeletal system morphogenesis
Biological Process GO:0043588 skin development
Biological Process GO:0097435 supramolecular fiber organization
Biological Process GO:0035313 wound healing, spreading of epidermal cells

Reference

[1] He C, Zhang J, Bai X, Lu C, Zhang K. Lysine lactylation-based insight to understanding the characterization of cervical cancer.. Biochim Biophys Acta Mol Basis Dis 1870(7):167356. 2024 Oct. PMID: 39025375.