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Overview

Uniprot IDP35244
Protein NameReplication protein A 14 kDa subunit
Gene NameRPA3
OrganismHomo sapiens

Kla Sites from experimental identification

Position Flanking peptide
23 MLAQFIDKPVCFVGR
33 CFVGRLEKIHPTGKM

Function

As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage (PubMed:17596542, PubMed:9430682). In the cellular response to DNA damage, the RPA complex controls DNA repair and DNA damage checkpoint activation. Through recruitment of ATRIP activates the ATR kinase a master regulator of the DNA damage response (PubMed:24332808). It is required for the recruitment of the DNA double-strand break repair factors RAD51 and RAD52 to chromatin, in response to DNA damage. Also recruits to sites of DNA damage proteins like XPA and XPG that are involved in nucleotide excision repair and is required for this mechanism of DNA repair (PubMed:7697716). Also plays a role in base excision repair (BER), probably through interaction with UNG (PubMed:9765279). RPA stimulates 5'-3' helicase activity of BRIP1/FANCJ (PubMed:17596542). Also recruits SMARCAL1/HARP, which is involved in replication fork restart, to sites of DNA damage. May also play a role in telomere maintenance. RPA3 has its own single-stranded DNA-binding activity and may be responsible for polarity of the binding of the complex to DNA (PubMed:19010961). As part of the alternative replication protein A complex, aRPA, binds single-stranded DNA and probably plays a role in DNA repair. Compared to the RPA2-containing, canonical RPA complex, may not support chromosomal DNA replication and cell cycle progression through S-phase. The aRPA may not promote efficient priming by DNA polymerase alpha but could support DNA synthesis by polymerase delta in presence of PCNA and replication factor C (RFC), the dual incision/excision reaction of nucleotide excision repair and RAD51-dependent strand exchange (PubMed:19996105)

Protein Sequence

10 MVDMMDLPRS 20 RINAGMLAQF 30 IDKPVCFVGR 40 LEKIHPTGKM 50 FILSDGEGKN 60 GTIELMEPLD 70 EEISGIVEVV 80 GRVTAKATIL 90 CTSYVQFKED 100 SHPFDLGLYN 110 EAVKIIHDFP 120 QFYPLGIVQH D

Gene Ontology

Classification GO ID Description
Cellular Component GO:0005662 DNA replication factor A complex
Cellular Component GO:0005654 nucleoplasm
Cellular Component GO:0035861 site of double-strand break
Molecular Function GO:0003684 damaged DNA binding
Molecular Function GO:0003697 single-stranded DNA binding
Biological Process GO:0006284 base-excision repair
Biological Process GO:0006281 DNA repair
Biological Process GO:0006260 DNA replication
Biological Process GO:0000724 double-strand break repair via homologous recombination
Biological Process GO:0006298 mismatch repair
Biological Process GO:0006289 nucleotide-excision repair
Biological Process GO:0000723 telomere maintenance

Reference

[1] Wu Q, Li Z, Gong T, Zheng X, Zhou X et al.. Porphyromonas gingivalis infection induces lysine lactylation reprogramming in human umbilical vein endothelial cells.. Front Cell Infect Microbiol 16:1706727. 2026. PMID: 41696360.