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Overview

Uniprot IDQ03114
Protein NameCyclin-dependent kinase 5
Gene NameCdk5
OrganismRattus norvegicus

Kla Sites from experimental identification

Position Flanking peptide
9 QKYEKLEKIGEGTYG

Function

Proline-directed serine/threonine-protein kinase essential for neuronal cell cycle arrest and differentiation and may be involved in apoptotic cell death in neuronal diseases by triggering abortive cell cycle re-entry. Interacts with D1 and D3-type G1 cyclins. Phosphorylates SRC, NOS3, VIM/vimentin, p35/CDK5R1, MEF2A, SIPA1L1, SH3GLB1, PXN, PAK1, MCAM/MUC18, SEPT5, SYN1, DNM1, AMPH, SYNJ1, CDK16, RAC1, RHOA, CDC42, TONEBP/NFAT5, MAPT/TAU, MAP1B, histone H1, p53/TP53, HDAC1, APEX1, PTK2/FAK1, huntingtin/HTT, ATM, MAP2, NEFH and NEFM. Regulates several neuronal development and physiological processes including neuronal survival, migration and differentiation, axonal and neurite growth, synaptogenesis, oligodendrocyte differentiation, synaptic plasticity and neurotransmission, by phosphorylating key proteins. Negatively regulates the CACNA1B/CAV2.2 -mediated Ca(2+) release probability at hippocampal neuronal soma and synaptic terminals (PubMed:23699505). Activated by interaction with CDK5R1 (p35) and CDK5R2 (p39), especially in postmitotic neurons, and promotes CDK5R1 (p35) expression in an autostimulation loop. Phosphorylates many downstream substrates such as Rho and Ras family small GTPases (e.g. PAK1, RAC1, RHOA, CDC42) or microtubule-binding proteins (e.g. MAPT/TAU, MAP2, MAP1B), and modulates actin dynamics to regulate neurite growth and/or spine morphogenesis. Also phosphorylates exocytosis associated proteins such as MCAM/MUC18, SEPT5, SYN1, and CDK16/PCTAIRE1 as well as endocytosis associated proteins such as DNM1, AMPH and SYNJ1 at synaptic terminals. In the mature central nervous system (CNS), regulates neurotransmitter movements by phosphorylating substrates associated with neurotransmitter release and synapse plasticity; synaptic vesicle exocytosis, vesicles fusion with the presynaptic membrane, and endocytosis. Promotes cell survival by activating anti-apoptotic proteins BCL2 and STAT3, and negatively regulating of JNK3/MAPK10 activity. Phosphorylation of p53/TP53 in response to genotoxic and oxidative stresses enhances its stabilization by preventing ubiquitin ligase-mediated proteasomal degradation, and induces transactivation of p53/TP53 target genes, thus regulating apoptosis. Phosphorylation of p35/CDK5R1 enhances its stabilization by preventing calpain-mediated proteolysis producing p25/CDK5R1 and avoiding ubiquitin ligase-mediated proteasomal degradation. During aberrant cell-cycle activity and DNA damage, p25/CDK5 activity elicits cell-cycle activity and double-strand DNA breaks that precedes neuronal death by deregulating HDAC1. DNA damage triggered phosphorylation of huntingtin/HTT in nuclei of neurons protects neurons against polyglutamine expansion as well as DNA damage mediated toxicity. Phosphorylation of PXN reduces its interaction with PTK2/FAK1 in matrix-cell focal adhesions (MCFA) during oligodendrocytes (OLs) differentiation. Negative regulator of Wnt/beta-catenin signaling pathway. Activator of the GAIT (IFN-gamma-activated inhibitor of translation) pathway, which suppresses expression of a post-transcriptional regulon of proinflammatory genes in myeloid cells; phosphorylates the linker domain of glutamyl-prolyl tRNA synthetase (EPRS) in a IFN-gamma-dependent manner, the initial event in assembly of the GAIT complex. Phosphorylation of SH3GLB1 is required for autophagy induction in starved neurons. Phosphorylation of TONEBP/NFAT5 in response to osmotic stress mediates its rapid nuclear localization. MEF2 is inactivated by phosphorylation in nucleus in response to neurotoxin, thus leading to neuronal apoptosis. APEX1 AP-endodeoxyribonuclease is repressed by phosphorylation, resulting in accumulation of DNA damage and contributing to neuronal death. NOS3 phosphorylation down regulates NOS3-derived nitrite (NO) levels. SRC phosphorylation mediates its ubiquitin-dependent degradation and thus leads to cytoskeletal reorganization. May regulate endothelial cell migration and angiogenesis via the modulation of lamellipodia formation. Involved in dendritic spine morphogenesis by mediating the EFNA1-EPHA4 signaling. The complex p35/CDK5 participates in the regulation of the circadian clock by modulating the function of CLOCK protein: phosphorylates CLOCK at 'Thr-451' and 'Thr-461' and regulates the transcriptional activity of the CLOCK-BMAL1 heterodimer in association with altered stability and subcellular distribution (By similarity)

Protein Sequence

10 MQKYEKLEKI 20 GEGTYGTVFK 30 AKNRETHEIV 40 ALKRVRLDDD 50 DEGVPSSALR 60 EICLLKELKH 70 KNIVRLHDVL 80 HSDKKLTLVF 90 EFCDQDLKKY 100 FDSCNGDLDP 110 EIVKSLLFQL 120 LKGLGFCHSR 130 NVLHRDLKPQ 140 NLLINRNGEL 150 KLADFGLARA 160 FGIPVRCYSA 170 EVVTLWYRPP 180 DVLFGAKLYS 190 TSIDMWSAGC 200 IFAELANAGR 210 PLFPGNDVDD 220 QLKRIFRLLG 230 TPTEEQWPAM 240 TKLPDYKPYP 250 MYPATTSLVN 260 VVPKLNATGR 270 DLLQNLLKCN 280 PVQRISAEEA 290 LQHPYFSDFC PP

Gene Ontology

Classification GO ID Description
Biological Process GO:0046826 negative regulation of protein export from nucleus
Cellular Component GO:0030424 axon
Cellular Component GO:0030054 cell junction
Cellular Component GO:0000307 cyclin-dependent protein kinase holoenzyme complex
Cellular Component GO:0005737 cytoplasm
Cellular Component GO:0005829 cytosol
Cellular Component GO:0030425 dendrite
Cellular Component GO:0030175 filopodium
Cellular Component GO:0098978 glutamatergic synapse
Cellular Component GO:0030426 growth cone
Cellular Component GO:0030027 lamellipodium
Cellular Component GO:0016020 membrane
Cellular Component GO:0031594 neuromuscular junction
Cellular Component GO:0043005 neuron projection
Cellular Component GO:0043025 neuronal cell body
Cellular Component GO:0005654 nucleoplasm
Cellular Component GO:0005634 nucleus
Cellular Component GO:0043204 perikaryon
Cellular Component GO:0005886 plasma membrane
Cellular Component GO:0098794 postsynapse
Cellular Component GO:0014069 postsynaptic density
Cellular Component GO:0098793 presynapse
Cellular Component GO:0016533 protein kinase 5 complex
Cellular Component GO:0098685 Schaffer collateral - CA1 synapse
Molecular Function GO:0030549 acetylcholine receptor activator activity
Molecular Function GO:0005524 ATP binding
Molecular Function GO:0004693 cyclin-dependent protein serine/threonine kinase activity
Molecular Function GO:0008092 cytoskeletal protein binding
Molecular Function GO:0046875 ephrin receptor binding
Molecular Function GO:0005176 ErbB-2 class receptor binding
Molecular Function GO:0043125 ErbB-3 class receptor binding
Molecular Function GO:0035173 histone kinase activity
Molecular Function GO:0051879 Hsp90 protein binding
Molecular Function GO:0035255 ionotropic glutamate receptor binding
Molecular Function GO:0016301 kinase activity
Molecular Function GO:0002039 p53 binding
Molecular Function GO:0004672 protein kinase activity
Molecular Function GO:0019901 protein kinase binding
Molecular Function GO:0106310 protein serine kinase activity
Molecular Function GO:0004674 protein serine/threonine kinase activity
Molecular Function GO:0030547 signaling receptor inhibitor activity
Molecular Function GO:0050321 tau-protein kinase activity
Biological Process GO:0006915 apoptotic process
Biological Process GO:0008306 associative learning
Biological Process GO:0048675 axon extension
Biological Process GO:0007409 axonogenesis
Biological Process GO:0048148 behavioral response to cocaine
Biological Process GO:0070509 calcium ion import
Biological Process GO:0051301 cell division
Biological Process GO:0016477 cell migration
Biological Process GO:0007160 cell-matrix adhesion
Biological Process GO:1904646 cellular response to amyloid-beta
Biological Process GO:0021954 central nervous system neuron development
Biological Process GO:0021695 cerebellar cortex development
Biological Process GO:0021697 cerebellar cortex formation
Biological Process GO:0021549 cerebellum development
Biological Process GO:0021987 cerebral cortex development
Biological Process GO:0022038 corpus callosum development
Biological Process GO:0030866 cortical actin cytoskeleton organization
Biological Process GO:0048813 dendrite morphogenesis
Biological Process GO:0006974 DNA damage response
Biological Process GO:0060079 excitatory postsynaptic potential
Biological Process GO:0006887 exocytosis
Biological Process GO:0030900 forebrain development
Biological Process GO:0021766 hippocampus development
Biological Process GO:0006886 intracellular protein transport
Biological Process GO:0021819 layer formation in cerebral cortex
Biological Process GO:0007005 mitochondrion organization
Biological Process GO:0008045 motor neuron axon guidance
Biological Process GO:0006936 muscle contraction
Biological Process GO:0060537 muscle tissue development
Biological Process GO:0030517 negative regulation of axon extension
Biological Process GO:1903234 negative regulation of calcium ion-dependent exocytosis of neurotransmitter
Biological Process GO:0045786 negative regulation of cell cycle
Biological Process GO:0045892 negative regulation of DNA-templated transcription
Biological Process GO:0031397 negative regulation of protein ubiquitination
Biological Process GO:0045861 negative regulation of proteolysis
Biological Process GO:0031914 negative regulation of synaptic plasticity
Biological Process GO:0007528 neuromuscular junction development
Biological Process GO:0051402 neuron apoptotic process
Biological Process GO:0030182 neuron differentiation
Biological Process GO:0001764 neuron migration
Biological Process GO:0031175 neuron projection development
Biological Process GO:0048812 neuron projection morphogenesis
Biological Process GO:0006913 nucleocytoplasmic transport
Biological Process GO:0048709 oligodendrocyte differentiation
Biological Process GO:0018105 peptidyl-serine phosphorylation
Biological Process GO:0018107 peptidyl-threonine phosphorylation
Biological Process GO:0045956 positive regulation of calcium ion-dependent exocytosis
Biological Process GO:0034352 positive regulation of glial cell apoptotic process
Biological Process GO:0043525 positive regulation of neuron apoptotic process
Biological Process GO:0099533 positive regulation of presynaptic cytosolic calcium concentration
Biological Process GO:0045860 positive regulation of protein kinase activity
Biological Process GO:0001934 positive regulation of protein phosphorylation
Biological Process GO:0090314 positive regulation of protein targeting to membrane
Biological Process GO:0046777 protein autophosphorylation
Biological Process GO:0035418 protein localization to synapse
Biological Process GO:0006468 protein phosphorylation
Biological Process GO:0032801 receptor catabolic process
Biological Process GO:0043113 receptor clustering
Biological Process GO:0045055 regulated exocytosis
Biological Process GO:1901987 regulation of cell cycle phase transition
Biological Process GO:0030334 regulation of cell migration
Biological Process GO:0061001 regulation of dendritic spine morphogenesis
Biological Process GO:0060078 regulation of postsynaptic membrane potential
Biological Process GO:0099509 regulation of presynaptic cytosolic calcium ion concentration
Biological Process GO:1903076 regulation of protein localization to plasma membrane
Biological Process GO:1905806 regulation of synapse pruning
Biological Process GO:0048167 regulation of synaptic plasticity
Biological Process GO:0051966 regulation of synaptic transmission, glutamatergic
Biological Process GO:0042220 response to cocaine
Biological Process GO:0048511 rhythmic process
Biological Process GO:0014044 Schwann cell development
Biological Process GO:0019233 sensory perception of pain
Biological Process GO:0042501 serine phosphorylation of STAT protein
Biological Process GO:0007519 skeletal muscle tissue development
Biological Process GO:0007416 synapse assembly
Biological Process GO:0001963 synaptic transmission, dopaminergic
Biological Process GO:0035249 synaptic transmission, glutamatergic
Biological Process GO:0048488 synaptic vesicle endocytosis
Biological Process GO:0048489 synaptic vesicle transport
Biological Process GO:0021537 telencephalon development
Biological Process GO:0008542 visual learning

Reference

[1] Chen Y, Sun W, Sun Z, Zhao H, Wu T et al.. Effect of electroacupuncture on hippocampal protein lactylation in a rat model of vascular dementia.. Front Neurol 16:1629474. 2025. PMID: 40963935.