Search Results

Overview

Uniprot IDQ13426
Protein NameDNA repair protein XRCC4
Gene NameXRCC4
OrganismHomo sapiens

Kla Sites from experimental identification

Position Flanking peptide
187 FILVLNEKKTKIRSL
188 ILVLNEKKTKIRSLH
197 KIRSLHNKLLNAAQE
285 RNLGTEPKMAPQENQ

Function

DNA non-homologous end joining (NHEJ) core factor, required for double-strand break repair and V(D)J recombination (PubMed:10757784, PubMed:10854421, PubMed:12517771, PubMed:16412978, PubMed:17124166, PubMed:17290226, PubMed:22228831, PubMed:25597996, PubMed:25742519, PubMed:25934149, PubMed:26100018, PubMed:26774286, PubMed:8548796). Acts as a scaffold protein that regulates recruitment of other proteins to DNA double-strand breaks (DSBs) (PubMed:15385968, PubMed:20852255, PubMed:26774286, PubMed:27437582). Associates with NHEJ1/XLF to form alternating helical filaments that bridge DNA and act like a bandage, holding together the broken DNA until it is repaired (PubMed:21768349, PubMed:21775435, PubMed:22287571, PubMed:26100018, PubMed:27437582, PubMed:28500754). The XRCC4-NHEJ1/XLF subcomplex binds to the DNA fragments of a DSB in a highly diffusive manner and robustly bridges two independent DNA molecules, holding the broken DNA fragments in close proximity to one other (PubMed:27437582). The mobility of the bridges ensures that the ends remain accessible for further processing by other repair factors (PubMed:27437582). Plays a key role in the NHEJ ligation step of the broken DNA during DSB repair via direct interaction with DNA ligase IV (LIG4): the LIG4-XRCC4 subcomplex reseals the DNA breaks after the gap filling is completed (PubMed:10757784, PubMed:10854421, PubMed:12517771, PubMed:17290226, PubMed:19837014, PubMed:9242410). XRCC4 stabilizes LIG4, regulates its subcellular localization and enhances LIG4's joining activity (PubMed:10757784, PubMed:10854421, PubMed:12517771, PubMed:17290226, PubMed:21982441, PubMed:22228831, PubMed:9242410). Binding of the LIG4-XRCC4 subcomplex to DNA ends is dependent on the assembly of the DNA-dependent protein kinase complex DNA-PK to these DNA ends (PubMed:10757784, PubMed:10854421). Promotes displacement of PNKP from processed strand break termini (PubMed:20852255, PubMed:28453785)

Protein Sequence

10 MERKISRIHL 20 VSEPSITHFL 30 QVSWEKTLES 40 GFVITLTDGH 50 SAWTGTVSES 60 EISQEADDMA 70 MEKGKYVGEL 80 RKALLSGAGP 90 ADVYTFNFSK 100 ESCYFFFEKN 110 LKDVSFRLGS 120 FNLEKVENPA 130 EVIRELICYC 140 LDTIAENQAK 150 NEHLQKENER 160 LLRDWNDVQG 170 RFEKCVSAKE 180 ALETDLYKRF 190 ILVLNEKKTK 200 IRSLHNKLLN 210 AAQEREKDIK 220 QEGETAICSE 230 MTADRDPVYD 240 ESTDEESENQ 250 TDLSGLASAA 260 VSKDDSIISS 270 LDVTDIAPSR 280 KRRQRMQRNL 290 GTEPKMAPQE 300 NQLQEKENSR 310 PDSSLPETSK 320 KEHISAENMS 330 LETLRNSSPE DLFDEI

Gene Ontology

Classification GO ID Description
Cellular Component GO:0005829 cytosol
Cellular Component GO:0032807 DNA ligase IV complex
Cellular Component GO:0005958 DNA-dependent protein kinase-DNA ligase 4 complex
Cellular Component GO:0070419 nonhomologous end joining complex
Cellular Component GO:0005654 nucleoplasm
Cellular Component GO:0005634 nucleus
Cellular Component GO:0035861 site of double-strand break
Molecular Function GO:0003677 DNA binding
Molecular Function GO:0019899 enzyme binding
Molecular Function GO:0070975 FHA domain binding
Molecular Function GO:0042802 identical protein binding
Molecular Function GO:0030674 protein-macromolecule adaptor activity
Biological Process GO:0006284 base-excision repair
Biological Process GO:1990683 DNA double-strand break attachment to nuclear envelope
Biological Process GO:0006302 double-strand break repair
Biological Process GO:0006303 double-strand break repair via nonhomologous end joining
Biological Process GO:0033152 immunoglobulin V(D)J recombination
Biological Process GO:0051351 positive regulation of ligase activity
Biological Process GO:1990166 protein localization to site of double-strand break
Biological Process GO:0010165 response to X-ray

Reference

[1] Yang Z, Yan C, Ma J, Peng P, Ren X et al.. Lactylome analysis suggests lactylation-dependent mechanisms of metabolic adaptation in hepatocellular carcinoma.. Nat Metab 5(1):61-79. 2023 Jan. PMID: 36593272.

[2] He C, Zhang J, Bai X, Lu C, Zhang K. Lysine lactylation-based insight to understanding the characterization of cervical cancer.. Biochim Biophys Acta Mol Basis Dis 1870(7):167356. 2024 Oct. PMID: 39025375.

[3] Guo X, Ren X, Yan C, Huang H. Quantitative Proteomics Reveals the Role of Lysine Lactylation in Lenalidomide-Resistance in Multiple Myeloma Cells.. ACS Chem Biol 20(7):1728-1738. 2025 Jul 18. PMID: 40590393.

[4] He J, Lai T, Zhou Z, Yang H, Lei Z et al.. Multiomics profiling reveals the involvement of protein lactylation in nonhomologous end joining pathway conferring radioresistance in lung adenocarcinoma cell.. Sci Rep 15(1):24651. 2025 Jul 9. PMID: 40634431.

[5] Wu Q, Li Z, Gong T, Zheng X, Zhou X et al.. Porphyromonas gingivalis infection induces lysine lactylation reprogramming in human umbilical vein endothelial cells.. Front Cell Infect Microbiol 16:1706727. 2026. PMID: 41696360.