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Overview

Uniprot IDQ5I0E7
Protein NameTransmembrane emp24 domain-containing protein 9
Gene NameTmed9
OrganismRattus norvegicus

Kla Sites from experimental identification

Position Flanking peptide
160 AEIAAKDKLSELQLR
71 YRTQLYDKQREEYQP

Function

Appears to be involved in vesicular protein trafficking, mainly in the early secretory pathway. In COPI vesicle-mediated retrograde transport involved in the coatomer recruitment to membranes of the early secretory pathway. Increases coatomer-dependent activity of ARFGAP2. Thought to play a crucial role in the specific retention of p24 complexes in cis-Golgi membranes; specifically contributes to the coupled localization of TMED2 and TMED10 in the cis-Golgi network. May be involved in organization of intracellular membranes, such as of the ER-Golgi intermediate compartment and the Golgi apparatus. Involved in ER localization of PTPN2 (By similarity)

Protein Sequence

10 MAAVRGVRVV 20 GTSPGLLLGR 30 GMRAFLLLLC 40 LAARGGALYF 50 HIGETEKKCF 60 IEEIPDETMV 70 IGNYRTQLYD 80 KQREEYQPAT 90 PGLGMFVEVK 100 DPEDKVILAR 110 QYGSEGRFTF 120 TSHTPGEHQI 130 CLHSNSTKFS 140 LFAGGMLRVH 150 LDIQVGEHAN 160 DYAEIAAKDK 170 LSELQLRVRQ 180 LVEQVEQIQK 190 EQNYQRWREE 200 RFRQTSESTN 210 QRVLWWSILQ 220 TLILVAIGVW 230 QMRHLKSFFE AKKLV

Gene Ontology

Classification GO ID Description
Cellular Component GO:0030134 COPII-coated ER to Golgi transport vesicle
Cellular Component GO:0005783 endoplasmic reticulum
Cellular Component GO:0005789 endoplasmic reticulum membrane
Cellular Component GO:0005793 endoplasmic reticulum-Golgi intermediate compartment
Cellular Component GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane
Cellular Component GO:0005794 Golgi apparatus
Cellular Component GO:0000139 Golgi membrane
Cellular Component GO:0008021 synaptic vesicle
Molecular Function GO:0019905 syntaxin binding
Biological Process GO:0048205 COPI coating of Golgi vesicle
Biological Process GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport
Biological Process GO:0007030 Golgi organization
Biological Process GO:0006886 intracellular protein transport

Reference

[1] Sheng L, Xu H, Wang Y, Ni J, Xiang T et al.. Systematic analysis of lysine lactylation in nucleus pulposus cells.. iScience 27(11):111157. 2024 Nov 15. PMID: 39524337.