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Overview

Uniprot IDQ5U3Z7
Protein NameSerine hydroxymethyltransferase
Gene NameShmt2
OrganismRattus norvegicus

Kla Sites from experimental identification

Position Flanking peptide
302 GVRTVDPKTGQEIPY
464 EVKRKTAKLQDFKSF
474 DFKSFLLKDPETSQR

Function

Interconversion of serine and glycine

Protein Sequence

10 MVPFSLLRTT 20 RPLQRCGQLV 30 CMAARAQHSE 40 VAQKQAGEAA 50 GGWTGQESLS 60 DSDPEIWELL 70 QREKDRQCRG 80 LELIASENFC 90 SRAALEALGS 100 CLNNKYSEGY 110 PGKRYYGGAE 120 VVDEIELLCQ 130 RRALEAFDLD 140 PAQWGVNVQP 150 YSGSPANLAA 160 YTALLQPHDR 170 IMGLDLPDGG 180 HLTHGYMSDV 190 KRISATSIFF 200 ESMPYKLNPQ 210 TGLIDYDQLA 220 LTARLFRPRL 230 IIAGTSAYAR 240 LIDYARMREV 250 CDEVKAHLLA 260 DMAHISGLVA 270 AKVIPSPFKY 280 ADIVTTTTHK 290 TLRGARSGLI 300 FYRKGVRTVD 310 PKTGQEIPYT 320 FEDRINFAVF 330 PSLQGGPHNH 340 AIAAVAVALK 350 QACTPMFREY 360 SLQVLRNAQA 370 MADALLKRGY 380 SLVSGGTDTH 390 LVLVDLRPKG 400 LDGARAERVL 410 ELVSITANKN 420 TCPGDRSAIT 430 PGGLRLGAPA 440 LTSRQFREDD 450 FRRVVDFIDE 460 GVNIGLEVKR 470 KTAKLQDFKS 480 FLLKDPETSQ 490 RLANLRQQVE 500 QFARGFPMPG FDER

Gene Ontology

Classification GO ID Description
Cellular Component GO:0070552 BRISC complex
Cellular Component GO:0005737 cytoplasm
Cellular Component GO:0005743 mitochondrial inner membrane
Cellular Component GO:0005759 mitochondrial matrix
Cellular Component GO:0042645 mitochondrial nucleoid
Cellular Component GO:0005739 mitochondrion
Cellular Component GO:0005634 nucleus
Molecular Function GO:0016597 amino acid binding
Molecular Function GO:0003682 chromatin binding
Molecular Function GO:0004372 glycine hydroxymethyltransferase activity
Molecular Function GO:0120567 hydroxytrimethyllysine aldolase activity
Molecular Function GO:0042802 identical protein binding
Molecular Function GO:0008732 L-allo-threonine aldolase activity
Molecular Function GO:0008168 methyltransferase activity
Molecular Function GO:0030170 pyridoxal phosphate binding
Biological Process GO:0015943 formate biosynthetic process
Biological Process GO:0006545 glycine biosynthetic process
Biological Process GO:0019264 glycine biosynthetic process from L-serine
Biological Process GO:0006544 glycine metabolic process
Biological Process GO:0006564 L-serine biosynthetic process
Biological Process GO:0006563 L-serine metabolic process
Biological Process GO:0032259 methylation
Biological Process GO:0006730 one-carbon metabolic process
Biological Process GO:0008284 positive regulation of cell population proliferation
Biological Process GO:0051289 protein homotetramerization
Biological Process GO:0070536 protein K63-linked deubiquitination
Biological Process GO:0051262 protein tetramerization
Biological Process GO:1903715 regulation of aerobic respiration
Biological Process GO:0070129 regulation of mitochondrial translation
Biological Process GO:0002082 regulation of oxidative phosphorylation
Biological Process GO:0034340 response to type I interferon
Biological Process GO:0035999 tetrahydrofolate interconversion
Biological Process GO:0046653 tetrahydrofolate metabolic process

Reference

[1] Sheng L, Xu H, Wang Y, Ni J, Xiang T et al.. Systematic analysis of lysine lactylation in nucleus pulposus cells.. iScience 27(11):111157. 2024 Nov 15. PMID: 39524337.

[2] Chen Y, Sun W, Sun Z, Zhao H, Wu T et al.. Effect of electroacupuncture on hippocampal protein lactylation in a rat model of vascular dementia.. Front Neurol 16:1629474. 2025. PMID: 40963935.