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Overview

Uniprot IDQ69LA6
Protein NameProbable pyridoxal 5'-phosphate synthase subunit PDX1.1
Gene NameOs07g0100200
OrganismOryza sativa subsp. japonica

Kla Sites from experimental identification

Position Flanking peptide
106 VTIPVMAKARIGHFV

Function

Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by PDX2. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Also plays an indirect role in resistance to singlet oxygen-generating photosensitizers

Protein Sequence

10 MATDGTGVVT 20 VYGSGTNGAA 30 LLEPSNHKSA 40 TFSVKVGLAQ 50 MLRGGVIMDV 60 VTPEQARIAE 70 EAGACAVMAL 80 ERVPADIRAQ 90 GGVARMSDPG 100 LIRDIKRAVT 110 IPVMAKARIG 120 HFVEAQILEA 130 IGVDYVDESE 140 VLTLADDAHH 150 INKHNFRVPF 160 VCGCRDLGEA 170 LRRIREGAAM 180 IRTKGEAGTG 190 NVVEAVRHVR 200 SVMGDIRALR 210 NMDDDEVFSY 220 AKRIAAPYDL 230 VMQTKQLGRL 240 PVVQFAAGGV 250 ATPADAALMM 260 QLGCDGVFVG 270 SGIFKSGDPA 280 RRARAIVQAV 290 THYSDPKILA 300 EVSSGLGEAM 310 VGINLSDPKV ERFAARSE

Gene Ontology

Classification GO ID Description
Cellular Component GO:0005829 cytosol
Molecular Function GO:0016843 amine-lyase activity
Molecular Function GO:0046982 protein heterodimerization activity
Molecular Function GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
Biological Process GO:0006520 amino acid metabolic process
Biological Process GO:0042823 pyridoxal phosphate biosynthetic process
Biological Process GO:0008615 pyridoxine biosynthetic process

Reference

[1] Meng X, Baine JM, Yan T, Wang S. Comprehensive Analysis of Lysine Lactylation in Rice (Oryza sativa) Grains.. J Agric Food Chem 69(29):8287-8297. 2021 Jul 28. PMID: 34264677.